RNA–Protein interactions for RNA: ENST00000528256.1

PICALM-208, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 4

Gene PICALM, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-208	ENST00000528256	TIMP3	P35625	211 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	SLC1A2	P43004	574 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	AP1S2	P56377	157 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	RAB38	P57729	211 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	STXBP1	P61764	594 aa	Known RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	SARNP	P82979	210 aa	Known RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	CCZ1B	P86790	482 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	CCZ1	P86791	482 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	REEP5	Q00765	189 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	SORD	Q00796	357 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	RBBP5	Q15291	538 aa	Known RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	CCNG2	Q16589	344 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	TMEM95	Q3KNT9	176 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	MMEL1	Q495T6	779 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	ACSF3	Q4G176	576 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	SGO1	Q5FBB7	561 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	TOR1AIP1	Q5JTV8	583 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	RAD9B	Q6WBX8	426 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	TUBA1A	Q71U36	451 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	GSTA5	Q7RTV2	222 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	CTAGE6	Q86UF2	777 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	LACC1	Q8IV20	430 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	LMNTD2	Q8IXW0	634 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF595	Q8IYB9	648 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	MUC20	Q8N307	709 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	CIART	Q8N365	385 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	LIX1	Q8N485	282 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	NAXE	Q8NCW5	288 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	MORN4	Q8NDC4	146 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	OR8K3	Q8NH51	312 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	NEIL3	Q8TAT5	605 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	LINC01560	Q8TB33	94 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	EEF1AKMT1	Q8WVE0	214 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	SECTM1	Q8WVN6	248 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	SLC5A11	Q8WWX8	675 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	ATL1	Q8WXF7	558 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	SMPDL3B	Q92485	455 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	NEIL2	Q969S2	332 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	LINGO1	Q96FE5	620 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	CAPZA3	Q96KX2	299 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	TSNARE1	Q96NA8	513 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	DACH2	Q96NX9	599 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	TUBA1C	Q9BQE3	449 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	AIF1L	Q9BQI0	150 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	FUZ	Q9BT04	418 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	OR8D2	Q9GZM6	311 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	SPNS1	Q9H2V7	528 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	EVA1A	Q9H8M9	152 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	UBTD1	Q9HAC8	227 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	PELI2	Q9HAT8	420 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	ACKR4	Q9NPB9	350 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	TCF7L2	Q9NQB0	619 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	QPCTL	Q9NXS2	382 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	TAS2R13	Q9NYV9	303 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	FBXO5	Q9UKT4	447 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	BOK	Q9UMX3	212 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	MRPS33	Q9Y291	106 aa	Known RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	LSM4	Q9Y4Z0	139 aa	Known RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	MAD1L1	Q9Y6D9	718 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	CLCA3P	Q9Y6N3	262 aa		4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	CHD3	Q12873	2000 aa	Known RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	SNRNP200	O75643	2136 aa	Known RBP	4.9	□□□□□ -1.63
PICALM-208	ENST00000528256	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	ZCWPW2	A0A1B0GU75	182 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	SDR42E2	A6NKP2	422 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	EEF1E1-BLOC1S5	C9J1V9	151 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	C4orf51	C9J302	202 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	BMPR1B	O00238	502 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	EEF1E1	O43324	174 aa	Known RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	ERI3	O43414	337 aa	Known RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF354A	O60765	605 aa	Predicted RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	CTNS	O60931	367 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	TIPRL	O75663	272 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	TNNI3	P19429	210 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF10	P21506	573 aa	Predicted RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	SAT1	P21673	171 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	OPRM1	P35372	400 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	MAGEA6	P43360	314 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	HNRNPF	P52597	415 aa	Known RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF136	P52737	540 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	BRWD1-AS2	P59051	145 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	KCNJ2	P63252	427 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	ACSM2A	Q08AH3	577 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	SERTAD2	Q14140	314 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	RCN2	Q14257	317 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.89	□□□□□ -1.63	1e-11	■■□□□ 12.2
PICALM-208	ENST00000528256	SIX1	Q15475	284 aa	Predicted RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF791	Q3KP31	576 aa	Predicted RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	PIGG	Q5H8A4	983 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	GFI1B	Q5VTD9	330 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	SLC22A10	Q63ZE4	541 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	NSUN5P2	Q63ZY6	315 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	WDR73	Q6P4I2	378 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	C9orf139	Q6ZV77	190 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	USP43	Q70EL4	1123 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	RRM2B	Q7LG56	351 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	TMPRSS11B	Q86T26	416 aa		4.89	□□□□□ -1.63

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