RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 RFWD2Q8NHY2 731 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 ABHD3Q8WU67 409 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 XAGE5Q8WWM1 108 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 HSD17B8Q92506 261 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 PMM1Q92871 262 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 PPP1R36Q96LQ0 422 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 LRRC37BQ96QE4 947 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 THUMPD3Q9BV44 507 aaKnown RBP12.64□□□□□ -0.39
CAPN1-212ENST00000527887 SRXN1Q9BYN0 137 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 OR51I1Q9H343 314 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 SERHL2Q9H4I8 314 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 COQ10BQ9H8M1 238 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 MKLN1Q9UL63 735 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 WDR45Q9Y484 360 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 SPIN1Q9Y657 262 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-212ENST00000527887 PCNX3Q9H6A9 2034 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 A0A0G2JND7 137 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 E9PBE3 544 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 KIAA0513O60268 411 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 CNOT4O95628 575 aaKnown RBP12.63□□□□□ -0.39
CAPN1-212ENST00000527887 INHBBP09529 407 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 OR12D1P0DN82 309 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 PAX1P15863 534 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 ENPP1P22413 925 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 ADSLP30566 484 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-212ENST00000527887 S100A3P33764 101 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 APOBEC1P41238 236 aaKnown RBP12.63□□□□□ -0.39
CAPN1-212ENST00000527887 MAGEA8P43361 318 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 CLK1P49759 484 aaKnown RBP12.63□□□□□ -0.39
CAPN1-212ENST00000527887 KHKP50053 298 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 CCR4P51679 360 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 AQP5P55064 265 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 SESN3P58005 492 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 PHC1P78364 1004 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 TIGD2Q4W5G0 525 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 SFRP5Q5T4F7 317 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 KRTAP1-3Q8IUG1 177 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 ATP6V1C2Q8NEY4 427 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 ROPN1LQ96C74 230 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 POM121Q96HA1 1249 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 CCDC115Q96NT0 180 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 HS3ST6Q96QI5 342 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 TMEM204Q9BSN7 226 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 CCDC28BQ9BUN5 200 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 BDH2Q9BUT1 245 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 TMEM120AQ9BXJ8 343 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 NUF2Q9BZD4 464 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 GSX2Q9BZM3 304 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 C12orf49Q9H741 205 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 EXOSC3Q9NQT5 275 aaKnown RBP12.63□□□□□ -0.39
CAPN1-212ENST00000527887 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-212ENST00000527887 KCNE5Q9UJ90 142 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 DCTN4Q9UJW0 460 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 LIPT1Q9Y234 373 aa12.63□□□□□ -0.39
CAPN1-212ENST00000527887 ZNF724A8MTY0 619 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 DNPH1O43598 174 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 CYTIPO60759 359 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 DIAPH2O60879 1101 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 GCM2O75603 506 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-212ENST00000527887 CYP7B1O75881 506 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 CPSF4O95639 269 aaKnown RBP12.62□□□□□ -0.39
CAPN1-212ENST00000527887 UBTFL6P0CB48 400 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-212ENST00000527887 IL32P24001 234 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 CHI3L1P36222 383 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-212ENST00000527887 PGM1P36871 562 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 MAP2K6P52564 334 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 HPCAP84074 193 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 RASGEF1BQ0VAM2 473 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 MERTKQ12866 999 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 ITGADQ13349 1161 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 PDK3Q15120 406 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 NDUFAF6Q330K2 333 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 SPANXN4Q5MJ08 99 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 Q5PR19 223 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 TYW3Q6IPR3 259 aaKnown RBP12.62□□□□□ -0.39
CAPN1-212ENST00000527887 ADAM5Q6NVV9 412 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 ZNF704Q6ZNC4 412 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-212ENST00000527887 TMPPEQ6ZT21 453 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 Q6ZT83 130 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 NUFIP2Q7Z417 695 aaKnown RBP12.62□□□□□ -0.39
CAPN1-212ENST00000527887 ANKRD46Q86W74 232 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 CMIPQ8IY22 773 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 ZNF619Q8N2I2 560 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 ZNF611Q8N823 705 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 GLB1L3Q8NCI6 653 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-212ENST00000527887 FAM71CQ8NEG0 241 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 KISS1RQ969F8 398 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-212ENST00000527887 PLPPR2Q96GM1 343 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 MAELQ96JY0 434 aaKnown RBP12.62□□□□□ -0.39
CAPN1-212ENST00000527887 OR5B2Q96R09 309 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 PSD2Q9BQI7 771 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 CXorf56Q9H5V9 222 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 SAR1AQ9NR31 198 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 PNPOQ9NVS9 261 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 MARCOQ9UEW3 520 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-212ENST00000527887 TRIM33Q9UPN9 1127 aa12.62□□□□□ -0.39
CAPN1-212ENST00000527887 A0A1W2PNR3 127 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 HS3ST1O14792 307 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 SLC22A2O15244 555 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 HNRNPCL1O60812 293 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms