RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CDK6Q00534 326 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 TNK1Q13470 666 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 FXNQ16595 210 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 VMACQ2NL98 169 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 NDUFAF6Q330K2 333 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 ACSF3Q4G176 576 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-204ENST00000526430 PDZK1Q5T2W1 519 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 TIGD3Q6B0B8 471 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 OR5M10Q6IEU7 315 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 CBLN3Q6UW01 205 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 C16orf62Q7Z3J2 963 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 ZNF619Q8N2I2 560 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 RBM15BQ8NDT2 890 aaKnown RBP9.82□□□□□ -0.84
NEDD8-204ENST00000526430 FAM71CQ8NEG0 241 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 NFKBIDQ8NI38 313 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 RAD21L1Q9H4I0 556 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 LDAHQ9H6V9 325 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-204ENST00000526430 FBXL2Q9UKC9 423 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 MRTO4Q9UKD2 239 aaKnown RBP9.82□□□□□ -0.84
NEDD8-204ENST00000526430 PACSIN3Q9UKS6 424 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 ABCG2Q9UNQ0 655 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 WDR45Q9Y484 360 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 GPC6Q9Y625 555 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-204ENST00000526430 FREM1Q5H8C1 2179 aa9.82□□□□□ -0.84
NEDD8-204ENST00000526430 A0A0G2JPF8 293 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 PRORSD1PA6NEY8 169 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 SERINC4A6NH21 518 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 EVPLLA8MZ36 301 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 HNRNPCL2B2RXH8 293 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 HNRNPCL3B7ZW38 293 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 EEF1E1-BLOC1S5C9J1V9 151 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 GNB5O14775 395 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 CASKO14936 926 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 EEF1E1O43324 174 aaKnown RBP9.81□□□□□ -0.84
NEDD8-204ENST00000526430 SCO2O43819 266 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 HNRNPCL1O60812 293 aaKnown RBP9.81□□□□□ -0.84
NEDD8-204ENST00000526430 TMCC2O75069 709 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 MFN2O95140 757 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 HNRNPCL4P0DMR1 293 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 NR2F1P10589 423 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 KRT20P35900 424 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 GSK3BP49841 420 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 SLC7A2P52569 658 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 EEFSECP57772 596 aaKnown RBP9.81□□□□□ -0.84
NEDD8-204ENST00000526430 LIPEQ05469 1076 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 CEACAM7Q14002 265 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 FGFBP1Q14512 234 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 GLIPR1L2Q4G1C9 344 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 GPAT3Q53EU6 434 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 TBCELQ5QJ74 424 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 GCNT6Q5T4J0 391 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 ATAD3BQ5T9A4 648 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 PRAMEF8Q5VWM4 474 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 PRAMEF7Q5VXH5 474 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 CCDC80Q76M96 950 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 VRK2Q86Y07 508 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 PGAM4Q8N0Y7 254 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 CLIP4Q8N3C7 705 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 METTL25Q8N6Q8 603 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 GATSQ8NAP1 163 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 OR2M3Q8NG83 312 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 ROBO4Q8WZ75 1007 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 PMM1Q92871 262 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 DOHHQ9BU89 302 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 OSBPL11Q9BXB4 747 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 HOXD1Q9GZZ0 328 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 ZFP64Q9NPA5 681 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 ZNF701Q9NV72 531 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-204ENST00000526430 THUMPD1Q9NXG2 353 aaKnown RBP9.81□□□□□ -0.84
NEDD8-204ENST00000526430 MED11Q9P086 117 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 P2RX2Q9UBL9 471 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 CDC42EP3Q9UKI2 254 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 ICAM5Q9UMF0 924 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 CORO2BQ9UQ03 480 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 TESMINQ9Y4I5 508 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 DTNAQ9Y4J8 743 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 WIF1Q9Y5W5 379 aa9.81□□□□□ -0.84
NEDD8-204ENST00000526430 FAM220BPB1ANY3 271 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 M0QX08 132 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 EFNA2O43921 213 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 ETS2P15036 469 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 CALB2P22676 271 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 CTSSP25774 331 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 OPRM1P35372 400 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 CRISP3P54108 245 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 B3GALT5-AS1P59052 145 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 KCNJ2P63252 427 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 EEF1A1P68104 462 aaKnown RBP9.8□□□□□ -0.84
NEDD8-204ENST00000526430 KCNJ10P78508 379 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 ZNF117Q03924 483 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 RBBP4Q09028 425 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 SCARB2Q14108 478 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 TOMM34Q15785 309 aaPredicted RBP9.8□□□□□ -0.84
NEDD8-204ENST00000526430 TMEM44Q2T9K0 475 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 REEP3Q6NUK4 255 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 ZNF836Q6ZNA1 936 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 PLCZ1Q86YW0 608 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 GPR32P1Q8NGA4 272 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 CNOT9Q92600 299 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms