RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 RS1O15537 224 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 CA11O75493 328 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 B3GALNT1O75752 331 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 IFNB1P01574 187 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 NUDT1P36639 197 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 LEPP41159 167 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 BIDP55957 195 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 KLF17Q5JT82 389 aaPredicted RBP2.76□□□□□ -1.97
CD44-215ENST00000525241 CASC10Q5T4H9 136 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 ACOT1Q86TX2 421 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 ENTHD1Q8IYW4 607 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 CLDN19Q8N6F1 224 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 OR10T2Q8NGX3 314 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 RPUSD4Q96CM3 377 aaKnown RBP2.76□□□□□ -1.97
CD44-215ENST00000525241 CCNL2Q96S94 520 aaPredicted RBP2.76□□□□□ -1.97
CD44-215ENST00000525241 MBOAT4Q96T53 435 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 ZNF670Q9BS34 389 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 SLC35A5Q9BS91 424 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 THUMPD2Q9BTF0 503 aaKnown RBP2.76□□□□□ -1.97
CD44-215ENST00000525241 POLR2J2Q9GZM3 115 aaKnown RBP2.76□□□□□ -1.97
CD44-215ENST00000525241 POLR2J3Q9H1A7 115 aaKnown RBP2.76□□□□□ -1.97
CD44-215ENST00000525241 NXF5Q9H1B4 397 aaKnown RBP2.76□□□□□ -1.97
CD44-215ENST00000525241 CHRNA9Q9UGM1 479 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 KIF25Q9UIL4 384 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 PRG3Q9Y2Y8 225 aaPredicted RBP2.76□□□□□ -1.97
CD44-215ENST00000525241 NEUROG3Q9Y4Z2 214 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 MAD1L1Q9Y6D9 718 aa2.76□□□□□ -1.97
CD44-215ENST00000525241 CLSPNQ9HAW4 1339 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 A0A1B0GWJ7 208 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 NPIPA7E9PJI5 369 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 GFYI3L273 518 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 K7EPI3 171 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 LGI1O95970 557 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 NPIPA8P0DM63 369 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 COX7A1P24310 79 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 RPS14P62263 151 aaKnown RBP2.75□□□□□ -1.97
CD44-215ENST00000525241 ARL6IP1Q15041 203 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 NSDHLQ15738 373 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 SYPL1Q16563 259 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 DNAJC21Q5F1R6 531 aaKnown RBP2.75□□□□□ -1.97
CD44-215ENST00000525241 C1orf146Q5VVC0 180 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 PYHIN1Q6K0P9 492 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 BLOC1S2Q6QNY1 142 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 SYT10Q6XYQ8 523 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 DHRSXQ8N5I4 330 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 NKAPP1Q8N9T2 125 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 CATSPER1Q8NEC5 780 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 IL22RA2Q969J5 263 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 TBX15Q96SF7 602 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 RIT2Q99578 217 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 SLC25A39Q9BZJ4 359 aaPredicted RBP2.75□□□□□ -1.97
CD44-215ENST00000525241 LIN28AQ9H9Z2 209 aaKnown RBP2.75□□□□□ -1.97
CD44-215ENST00000525241 MYOZ2Q9NPC6 264 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 NUDT15Q9NV35 164 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 AIG1Q9NVV5 245 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 HPF1Q9NWY4 346 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 TBK1Q9UHD2 729 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 NPIPA1Q9UND3 350 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 RASD1Q9Y272 281 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 LTBP1Q14766 1721 aa2.75□□□□□ -1.97
CD44-215ENST00000525241 IGKV1D-8A0A087WSZ0 117 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 HELTA6NFD8 242 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 KRTAP4-16G5E9R7 235 aaPredicted RBP2.74□□□□□ -1.97
CD44-215ENST00000525241 SMPD2O60906 423 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 IGHV4-34P06331 123 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 ZNF32P17041 273 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 POLR2EP19388 210 aaKnown RBP2.74□□□□□ -1.97
CD44-215ENST00000525241 DRD5P21918 477 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 FGF9P31371 208 aaPredicted RBP2.74□□□□□ -1.97
CD44-215ENST00000525241 CA8P35219 290 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 PTGDSP41222 190 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 HSD17B7P56937 341 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 KRTAP10-8P60410 259 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 TRIM16LQ309B1 348 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 USH1GQ495M9 461 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 CCDC92Q53HC0 331 aaPredicted RBP2.74□□□□□ -1.97
CD44-215ENST00000525241 PAGE3Q5JUK9 113 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 RIPPLY2Q5TAB7 128 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 TIFABQ6ZNK6 161 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 RNF165Q6ZSG1 346 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 ZSCAN30Q86W11 494 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 OR4D9Q8NGE8 314 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 MRPS31Q92665 395 aaKnown RBP2.74□□□□□ -1.97
CD44-215ENST00000525241 SPATA16Q9BXB7 569 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 TREM2Q9NZC2 230 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 PHF11Q9UIL8 331 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 LAMP5Q9UJQ1 280 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 CACNG2Q9Y698 323 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 KDRP35968 1356 aa2.74□□□□□ -1.97
CD44-215ENST00000525241 BTN3A3O00478 584 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 BCAS1O75363 584 aaPredicted RBP2.73□□□□□ -1.97
CD44-215ENST00000525241 INSP01308 110 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 ZNF853P0CG23 659 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 RBMY1CP0DJD4 496 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 EPB41P11171 864 aaKnown RBP2.73□□□□□ -1.97
CD44-215ENST00000525241 TOP1P11387 765 aaKnown RBP2.73□□□□□ -1.97
CD44-215ENST00000525241 RCC1P18754 421 aaPredicted RBP2.73□□□□□ -1.97
CD44-215ENST00000525241 PAX7P23759 505 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 PRDX3P30048 256 aaKnown RBP2.73□□□□□ -1.97
CD44-215ENST00000525241 RPS10P46783 165 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms