RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 MIER2Q8N344 545 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 OR9I1Q8NGQ6 314 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 LRRC8CQ8TDW0 803 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 ITCHQ96J02 903 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 ACTR6Q9GZN1 396 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 MTHFD2LQ9H903 347 aaPredicted RBP16.52■□□□□ 0.24
CAPN1-203ENST00000525013 UBTD1Q9HAC8 227 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 GP6Q9HCN6 339 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 SLC6A13Q9NSD5 602 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 KLHL9Q9P2J3 617 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 SPIN1Q9Y657 262 aaPredicted RBP16.52■□□□□ 0.24
CAPN1-203ENST00000525013 AGAP5A6NIR3 686 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 SULT2B1O00204 365 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 THBDP07204 575 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 IL7RP16871 459 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 CD53P19397 219 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 CCNA2P20248 432 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 CRATP43155 626 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 IDH2P48735 452 aaKnown RBP16.51■□□□□ 0.23
CAPN1-203ENST00000525013 DIO1P49895 249 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 GNA13Q14344 377 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 SYT14P1Q58G82 188 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 C6orf10Q5SRN2 563 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 EPGNQ6UW88 154 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 TFAP2EQ6VUC0 442 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 TMPPEQ6ZT21 453 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 CXorf67Q86X51 503 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-203ENST00000525013 WFDC8Q8IUA0 241 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 SLC25A43Q8WUT9 341 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-203ENST00000525013 WDR60Q8WVS4 1066 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 VPS33AQ96AX1 596 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 ZNF775Q96BV0 537 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-203ENST00000525013 ATP6V1G3Q96LB4 118 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 TACO1Q9BSH4 297 aaKnown RBP16.51■□□□□ 0.23
CAPN1-203ENST00000525013 CCDC106Q9BWC9 280 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 EXOSC3Q9NQT5 275 aaKnown RBP16.51■□□□□ 0.23
CAPN1-203ENST00000525013 CTPS2Q9NRF8 586 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 CHRNA9Q9UGM1 479 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 GPR52Q9Y2T5 361 aa16.51■□□□□ 0.23
CAPN1-203ENST00000525013 SMAD9O15198 467 aaKnown RBP16.5■□□□□ 0.23
CAPN1-203ENST00000525013 FESP07332 822 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 ETFAP13804 333 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 KLK2P20151 261 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 CSNK2A1P68400 391 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-203ENST00000525013 GRINAQ7Z429 371 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 CMIPQ8IY22 773 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 STEAP2Q8NFT2 490 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 DYDC1Q8WWB3 177 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 DNAJA3Q96EY1 480 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 AURKBQ96GD4 344 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-203ENST00000525013 C7orf26Q96N11 449 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 HS3ST6Q96QI5 342 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 TMUB1Q9BVT8 246 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 TPT1P8Q9HAU6 139 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 P2RX2Q9UBL9 471 aa16.5■□□□□ 0.23
CAPN1-203ENST00000525013 FAM234BA2RU67 622 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 AP3D1O14617 1153 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 POLR3GO15318 223 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-203ENST00000525013 CYTIPO60759 359 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 DBIP07108 87 aaKnown RBP16.49■□□□□ 0.23
CAPN1-203ENST00000525013 ZCCHC18P0CG32 403 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 PSMB1P20618 241 aaKnown RBP16.49■□□□□ 0.23
CAPN1-203ENST00000525013 IL32P24001 234 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 MAGEA8P43361 318 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 STX1BP61266 288 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 ADAM8P78325 824 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 PLAURQ03405 335 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 TSC22D1Q15714 1073 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 GTDC1Q4AE62 458 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 BEX5Q5H9J7 111 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 MSANTD1Q6ZTZ1 278 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 PEX5LQ8IYB4 626 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 GABRG1Q8N1C3 465 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 GOLGA6L1Q8N7Z2 621 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 S100PBPQ96BU1 408 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 ZHX1-C8orf76Q96EF9 292 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 PSD2Q9BQI7 771 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 HDHD5Q9BXW7 423 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 OR11A1Q9GZK7 315 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 BCO1Q9HAY6 547 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 SLCO1B3Q9NPD5 702 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 TCF7L2Q9NQB0 619 aa16.49■□□□□ 0.23
CAPN1-203ENST00000525013 BEX4Q9NWD9 120 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-203ENST00000525013 CADP27708 2225 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-203ENST00000525013 KLF4O43474 513 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 ADAM11O75078 769 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 GCM2O75603 506 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-203ENST00000525013 ADAP00813 363 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 UQCRBP14927 111 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 HTR3AP46098 478 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 DSTNP60981 165 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 FOXD4Q12950 439 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-203ENST00000525013 ACKR1Q16570 336 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 TTMPQ5BVD1 217 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 MRPL2Q5T653 305 aaKnown RBP16.48■□□□□ 0.23
CAPN1-203ENST00000525013 MTDHQ86UE4 582 aaKnown RBP16.48■□□□□ 0.23
CAPN1-203ENST00000525013 ADGRG3Q86Y34 549 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 PMM1Q92871 262 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 ARL5BQ96KC2 179 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms