RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 NKAIN4Q8IVV8 208 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC37A3Q8NCC5 494 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC46A1Q96NT5 459 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 SDF2Q99470 211 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 PRDM9Q9NQV7 894 aa12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 AK6Q9Y3D8 172 aaKnown RBP12.14□□□□□ -0.47
PCDHGB1-201ENST00000523390 INMT-MINDY4F8WBC2 141 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 H7C1C5 153 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 LCN6P62502 163 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 GPLD1P80108 840 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 POU3F1Q03052 451 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 RUNX2Q13950 521 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 MEPCEQ7L2J0 689 aaKnown RBP12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 SYT13Q7L8C5 426 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF100Q8IYN0 542 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 C4orf36Q96KX1 117 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 ATG5Q9H1Y0 275 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 ABCG5Q9H222 651 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 NTNG1Q9Y2I2 539 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 PCDHGB2Q9Y5G2 931 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 TEX13CA0A0J9YWL9 993 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 A0A1B0GX78 115 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 CIB4A0PJX0 185 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 METTL12A8MUP2 240 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 ACP2P11117 423 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 TRHRP34981 398 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 CAPZBP47756 277 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 NKX2-5P52952 324 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 PPP5CP53041 499 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 GNG2P59768 71 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 SPCS2Q15005 226 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 PGBD2Q6P3X8 592 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 CCBE1Q6UXH8 406 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF836Q6ZNA1 936 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 RASSF6Q6ZTQ3 369 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 OR5AK2Q8NH90 309 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 NUDT22Q9BRQ3 303 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 HHATLQ9HCP6 504 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 ACER3Q9NUN7 267 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 PLEKHA6Q9Y2H5 1048 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 MMACHCQ9Y4U1 282 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 TCRBV5S2A0A599 114 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 FRKP42685 505 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 SCRN3Q0VDG4 424 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 CRMP1Q14194 572 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 KIAA0040Q15053 153 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 NDUFA5Q16718 116 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 NKAIN1Q4KMZ8 207 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 GDPGP1Q6ZNW5 385 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 LINC01555Q8NAE3 123 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 GALNT6Q8NCL4 622 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 DUSP22Q9NRW4 184 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 TBC1D24Q9ULP9 559 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 C2orf72A6NCS6 295 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 CLDN24A6NM45 220 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 WRBO00258 174 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 MAP2K3P46734 347 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 OPN5Q6U736 354 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 INTS14Q96SY0 518 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 CSF3RQ99062 836 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 SEMA4GQ9NTN9 838 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 MRPL15Q9P015 296 aaKnown RBP12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 PSORS1C1Q9UIG5 152 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC22A7Q9Y694 548 aa12.13□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF701M0R085 212 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 PIP5K1CO60331 668 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 CHRM4P08173 479 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 CRABP1P29762 137 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 CTBP2P56545 445 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 GLO1Q04760 184 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 PRICKLE2Q7Z3G6 844 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 KLHDC8BQ8IXV7 354 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 RNF113BQ8IZP6 322 aaKnown RBP12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 OR13C3Q8NGS6 347 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 CEP76Q8TAP6 659 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 LRRC61Q9BV99 259 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 ATP13A2Q9NQ11 1180 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 ITGB1BP2Q9UKP3 347 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 PCDHGA10Q9Y5H3 936 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 NOX1Q9Y5S8 564 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 LGI1O95970 557 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 IGFBP1P08833 259 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 EIF2B1Q14232 305 aaKnown RBP12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF322Q6U7Q0 402 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 RHOXF1Q8NHV9 184 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 HMGCLL1Q8TB92 370 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 BCL7BQ9BQE9 202 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC25A18Q9H1K4 315 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 EIF3KQ9UBQ5 218 aaKnown RBP12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF69Q9UC07 566 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 SATB2Q9UPW6 733 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 CACNA1EQ15878 2313 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 A0A087WUU8 490 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 C5orf51A6NDU8 294 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 UCHL1P09936 223 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 PRPH2P23942 346 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 TRIM23P36406 574 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 ALDH3B2P48448 385 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 TMEM17Q86X19 198 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 TSLPQ969D9 159 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms