RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 GALNT10Q86SR1 603 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 ADGRG3Q86Y34 549 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 KIF18BQ86Y91 864 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 GATSQ8NAP1 163 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 PNPT1Q8TCS8 783 aaKnown RBP8.48□□□□□ -1.05
CLK4-209ENST00000521621 BOD1Q96IK1 185 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 NPDC1Q9NQX5 325 aaPredicted RBP8.48□□□□□ -1.05
CLK4-209ENST00000521621 SH3BGRL2Q9UJC5 107 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 PACSIN3Q9UKS6 424 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 ZGRF1Q86YA3 2104 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 FAM221AA4D161 298 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 H3BML4 177 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 MRASO14807 208 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 ZNHIT1O43257 154 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 CYTIPO60759 359 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 NPIPB7O75200 414 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 SYNGR4O95473 234 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 TGM6O95932 706 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 CARD18P57730 90 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 H3F3AP84243 136 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 DAZAP2Q15038 168 aaPredicted RBP8.48□□□□□ -1.05
CLK4-209ENST00000521621 VMACQ2NL98 169 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 TMPPEQ6ZT21 453 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 FAM214BQ7L5A3 538 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 MTDHQ86UE4 582 aaKnown RBP8.48□□□□□ -1.05
CLK4-209ENST00000521621 ZNF524Q96C55 264 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 DDIT4LQ96D03 193 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 CMTM5Q96DZ9 223 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 SH3YL1Q96HL8 342 aaPredicted RBP8.48□□□□□ -1.05
CLK4-209ENST00000521621 ZNF559Q9BR84 538 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 TRIM2Q9C040 744 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 ABCD2Q9UBJ2 740 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 HTR3EA5X5Y0 456 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 A8MXE2 369 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 EIF1BO60739 113 aaKnown RBP8.47□□□□□ -1.05
CLK4-209ENST00000521621 NUDT7P0C024 238 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 UBTFL6P0CB48 400 aaPredicted RBP8.47□□□□□ -1.05
CLK4-209ENST00000521621 COX4I1P13073 169 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 CD1EP15812 388 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 SSTR2P30874 369 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 KIR2DL2P43627 348 aaPredicted RBP8.47□□□□□ -1.05
CLK4-209ENST00000521621 CASP9P55211 416 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 FXNQ16595 210 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 NRF1Q16656 503 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 C10orf111Q8N326 155 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 ADPRHL1Q8NDY3 354 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 NFKBIDQ8NI38 313 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 FAM222BQ8WU58 562 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 STARD4Q96DR4 205 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 KLHDC3Q9BQ90 382 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 EFCAB1Q9HAE3 211 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 FANCFQ9NPI8 374 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 ARL2BPQ9Y2Y0 163 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 HIVEP3Q5T1R4 2406 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 ADAM11O75078 769 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 BCAS1O75363 584 aaPredicted RBP8.47□□□□□ -1.05
CLK4-209ENST00000521621 GCM2O75603 506 aaPredicted RBP8.47□□□□□ -1.05
CLK4-209ENST00000521621 LGI1O95970 557 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 PNMTP11086 282 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 PPP3CBP16298 524 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 KCNJ5P48544 419 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 SYT14P1Q58G82 188 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 ATG4DQ86TL0 474 aaPredicted RBP8.47□□□□□ -1.05
CLK4-209ENST00000521621 SNX32Q86XE0 403 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 VRK2Q86Y07 508 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 DNAJA4Q8WW22 397 aaPredicted RBP8.47□□□□□ -1.05
CLK4-209ENST00000521621 OSTF1Q92882 214 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 THOC1Q96FV9 657 aaKnown RBP8.47□□□□□ -1.05
CLK4-209ENST00000521621 NPAS1Q99742 590 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 SF3B5Q9BWJ5 86 aaKnown RBP8.47□□□□□ -1.05
CLK4-209ENST00000521621 KLHL13Q9P2N7 655 aa8.47□□□□□ -1.05
CLK4-209ENST00000521621 TMED7-TICAM2A0A0A6YYA0 188 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 LOC102725191A0A1B0GVB3 256 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 KDM4EB2RXH2 506 aaPredicted RBP8.46□□□□□ -1.05
CLK4-209ENST00000521621 EIF1AYO14602 144 aaKnown RBP8.46□□□□□ -1.05
CLK4-209ENST00000521621 DCTN3O75935 186 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 PRKD3O94806 890 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 IFNA14P01570 189 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 COX6B1P14854 86 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 CD247P20963 164 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 IDH2P48735 452 aaKnown RBP8.46□□□□□ -1.05
CLK4-209ENST00000521621 KRT72Q14CN4 511 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 NDUFAF6Q330K2 333 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 ZNF613Q6PF04 617 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 LINC00114Q6XXX2 140 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 C3P1Q6ZMU1 363 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 P4HA3Q7Z4N8 544 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 CCDC71Q8IV32 467 aaPredicted RBP8.46□□□□□ -1.05
CLK4-209ENST00000521621 TMCO5AQ8N6Q1 288 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 OR10Q1Q8NGQ4 319 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 ZNF583Q96ND8 569 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 TRIM8Q9BZR9 551 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 CTPS2Q9NRF8 586 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 KLHL28Q9NXS3 571 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 TNFRSF10DQ9UBN6 386 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 OSGIN1Q9UJX0 560 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 TMED7Q9Y3B3 224 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 EMC9Q9Y3B6 208 aa8.46□□□□□ -1.05
CLK4-209ENST00000521621 FLNCQ14315 2725 aa8.46□□□□□ -1.06
CLK4-209ENST00000521621 AP3D1O14617 1153 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms