RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 BIRC5O15392 142 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 OR1F1O43749 312 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 LCMT2O60294 686 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ERAL1O75616 437 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 OR2B3O76000 313 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TPPPO94811 219 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 SUPT7LO94864 414 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TNFSF15O95150 251 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 SIX3O95343 332 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 CLDN9O95484 217 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 OTCP00480 354 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 SERPINE1P05121 402 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 BPGMP07738 259 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 RPS17P08708 135 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 SELLP14151 372 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 EZRP15311 586 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 GNAZP19086 355 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 MAGP20916 626 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 CXCR2P25025 360 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 RBMS1P29558 406 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ETV5P41161 510 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 HNF4AP41235 474 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 GABRA4P48169 554 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 GPR143P51810 404 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 NAGLUP54802 743 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 MFAP4P55083 255 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 CDH13P55290 713 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 VSX2P58304 361 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ERVPABLB-1P60509 514 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 RPS15AP62244 130 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 REEP5Q00765 189 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 IRF8Q02556 426 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 CHIT1Q13231 466 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 DOC2AQ14183 400 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 PCLAFQ15004 111 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 OTOGLQ3ZCN5 2332 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 KRTCAP3Q53RY4 240 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TTMPQ5BVD1 217 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 FBXO48Q5FWF7 155 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 XKR6Q5GH73 641 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 PAGE2BQ5JRK9 111 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 WDR38Q5JTN6 314 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TCTE1Q5JU00 501 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF678Q5SXM1 525 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 DCAF12Q5T6F0 453 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 HHATQ5VTY9 493 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 LIPJQ5W064 366 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 HIST2H2AA3Q6FI13 130 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 MED27Q6P2C8 311 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 CYB5D1Q6P9G0 228 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TMIGD1Q6UXZ0 262 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 GOLGA7Q7Z5G4 137 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ADCK2Q7Z695 626 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TMPRSS11BQ86T26 416 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 NUDCD3Q8IVD9 361 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 C10orf107Q8IVU9 208 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 MCEMP1Q8IX19 187 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 LSMEM2Q8N112 164 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TBC1D19Q8N5T2 526 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 CCNYL1Q8N7R7 359 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 L3MBTL4Q8NA19 623 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 MFSD9Q8NBP5 474 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ADAD2Q8NCV1 583 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF740Q8NDX6 193 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TRPC4APQ8TEL6 797 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 N4BP2L2Q92802 583 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 UBE2E3Q969T4 207 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ATP6V1E2Q96A05 226 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 RERGQ96A58 199 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TM4SF19Q96DZ7 209 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 CNDP1Q96KN2 507 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF285Q96NJ3 590 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 OR2A5Q96R48 311 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 OR6C1Q96RD1 312 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF382Q96SR6 550 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ASCL2Q99929 193 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 AIF1LQ9BQI0 150 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 EFCAB11Q9BUY7 163 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 NTMT1Q9BV86 223 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 DDA1Q9BW61 102 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 EGLN1Q9GZT9 426 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 DRC3Q9H069 523 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 RHBGQ9H310 441 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 NOL11Q9H8H0 719 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ACTR8Q9H981 624 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 FGF21Q9NSA1 209 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 NKIRAS1Q9NYS0 192 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 PISDQ9UG56 409 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 PCTPQ9UKL6 214 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 KLK13Q9UKR3 277 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 RARRES3Q9UL19 164 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF490Q9ULM2 529 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 SATB2Q9UPW6 733 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 EXO1Q9UQ84 846 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 STK38LQ9Y2H1 464 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 NEUROG3Q9Y4Z2 214 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 AP1M2Q9Y6Q5 423 aa2.89□□□□□ -1.95
VPS13B-209ENST00000521559 SPTBN5Q9NRC6 3674 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 TNRC6BQ9UPQ9 1833 aaKnown RBP2.89□□□□□ -1.95
VPS13B-209ENST00000521559 FANCMQ8IYD8 2048 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms