RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 BCO1Q9HAY6 547 aa18.24■□□□□ 0.51
SNHG6-203ENST00000520944 NKIRAS1Q9NYS0 192 aa18.24■□□□□ 0.51
SNHG6-203ENST00000520944 LIPT1Q9Y234 373 aa18.24■□□□□ 0.51
SNHG6-203ENST00000520944 GOLGA8QA0A0J9YX86 632 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 GOLGA8OA6NCC3 632 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 GOLGA8NF8WBI6 632 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 HMGN4O00479 90 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 CYTIPO60759 359 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 H6PDO95479 791 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 FKBP2P26885 142 aaKnown RBP18.23■□□□□ 0.51
SNHG6-203ENST00000520944 DIO1P49895 249 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 CHRNEQ04844 493 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 ITGADQ13349 1161 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 SYT14P1Q58G82 188 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 PRSS57Q6UWY2 283 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 TMPPEQ6ZT21 453 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 KRTAP1-3Q8IUG1 177 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 GLB1L3Q8NCI6 653 aaPredicted RBP18.23■□□□□ 0.51
SNHG6-203ENST00000520944 FAM71CQ8NEG0 241 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 ZG16BQ96DA0 208 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 PERPQ96FX8 193 aa18.23■□□□□ 0.51
SNHG6-203ENST00000520944 TRNT1Q96Q11 434 aaKnown RBP18.23■□□□□ 0.51
SNHG6-203ENST00000520944 C9JVG2 144 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 SMAD9O15198 467 aaKnown RBP18.22■□□□□ 0.51
SNHG6-203ENST00000520944 SNNO75324 88 aaPredicted RBP18.22■□□□□ 0.51
SNHG6-203ENST00000520944 ERLIN1O75477 346 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 INHBBP09529 407 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 IL12AP29459 219 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 FUT5Q11128 374 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 GNA13Q14344 377 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 CAPRIN1Q14444 709 aaKnown RBP18.22■□□□□ 0.51
SNHG6-203ENST00000520944 TSC22D1Q15714 1073 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 HMGN2P46Q86SG4 172 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 RAB3IL1Q8TBN0 382 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 TMEM171Q8WVE6 324 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 ZNF775Q96BV0 537 aaPredicted RBP18.22■□□□□ 0.51
SNHG6-203ENST00000520944 ZHX1-C8orf76Q96EF9 292 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 CCDC106Q9BWC9 280 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 MTHFD2LQ9H903 347 aaPredicted RBP18.22■□□□□ 0.51
SNHG6-203ENST00000520944 EXOSC3Q9NQT5 275 aaKnown RBP18.22■□□□□ 0.51
SNHG6-203ENST00000520944 CTPS2Q9NRF8 586 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 CHRNA9Q9UGM1 479 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 GPR45Q9Y5Y3 372 aa18.22■□□□□ 0.51
SNHG6-203ENST00000520944 ZNF724A8MTY0 619 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 ZNF814B7Z6K7 855 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 IL6P05231 212 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 GSNP06396 782 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 FESP07332 822 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 IDO1P14902 403 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 OR3A2P47893 321 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 SLC18A1P54219 525 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 MAGOHP61326 146 aaKnown RBP18.21■□□□□ 0.51
SNHG6-203ENST00000520944 SYPL1Q16563 259 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 Q6ZT83 130 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 GRINAQ7Z429 371 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 YTHDF3Q7Z739 585 aaKnown RBP18.21■□□□□ 0.51
SNHG6-203ENST00000520944 GALNT5Q7Z7M9 940 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 MTDHQ86UE4 582 aaKnown RBP18.21■□□□□ 0.51
SNHG6-203ENST00000520944 CMIPQ8IY22 773 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 ZNF100Q8IYN0 542 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 POM121Q96HA1 1249 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 INPP5KQ9BT40 448 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 CXorf56Q9H5V9 222 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 ESRP2Q9H6T0 727 aaKnown RBP18.21■□□□□ 0.51
SNHG6-203ENST00000520944 MANSC1Q9H8J5 431 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 EMC3Q9P0I2 261 aa18.21■□□□□ 0.51
SNHG6-203ENST00000520944 ING1Q9UK53 422 aaPredicted RBP18.21■□□□□ 0.51
SNHG6-203ENST00000520944 PRAMEF27A3QJZ7 478 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 FAM171A2A8MVW0 826 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 RFXANKO14593 260 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 HS3ST1O14792 307 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 BCAS1O75363 584 aaPredicted RBP18.2■□□□□ 0.5
SNHG6-203ENST00000520944 SLC22A3O75751 556 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 KRT75O95678 551 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 PLAUP00749 431 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 NR2F1P10589 423 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 CDKN2CP42773 168 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 HTR3AP46098 478 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 IDH2P48735 452 aaKnown RBP18.2■□□□□ 0.5
SNHG6-203ENST00000520944 CLK1P49759 484 aaKnown RBP18.2■□□□□ 0.5
SNHG6-203ENST00000520944 TAB1Q15750 504 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 LRRC74BQ6ZQY2 392 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 BHLHA15Q7RTS1 189 aaPredicted RBP18.2■□□□□ 0.5
SNHG6-203ENST00000520944 ZNF611Q8N823 705 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 ANKFN1Q8N957 763 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 AKAP1Q92667 903 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNHG6-203ENST00000520944 PMM1Q92871 262 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 Q96MF0 132 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 ZNF300Q96RE9 604 aaPredicted RBP18.2■□□□□ 0.5
SNHG6-203ENST00000520944 TMEM204Q9BSN7 226 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 GSX2Q9BZM3 304 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 HDGFL3Q9Y3E1 203 aa18.2■□□□□ 0.5
SNHG6-203ENST00000520944 AGAP5A6NIR3 686 aa18.19■□□□□ 0.5
SNHG6-203ENST00000520944 CLDN24A6NM45 220 aa18.19■□□□□ 0.5
SNHG6-203ENST00000520944 TMCC2O75069 709 aa18.19■□□□□ 0.5
SNHG6-203ENST00000520944 ANP32DO95626 131 aa18.19■□□□□ 0.5
SNHG6-203ENST00000520944 C1QCP02747 245 aa18.19■□□□□ 0.5
SNHG6-203ENST00000520944 CD3EP07766 207 aa18.19■□□□□ 0.5
SNHG6-203ENST00000520944 UQCRBP14927 111 aa18.19■□□□□ 0.5
SNHG6-203ENST00000520944 IL7RP16871 459 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms