RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SLC35A3Q9Y2D2 325 aa17.39■□□□□ 0.37
PABPC1-215ENST00000520804 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.39■□□□□ 0.37
PABPC1-215ENST00000520804 WDR45Q9Y484 360 aa17.39■□□□□ 0.37
PABPC1-215ENST00000520804 INAFM1C9JVW0 142 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 SULT2B1O00204 365 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 ANKRD28O15084 1053 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 BCAS1O75363 584 aaPredicted RBP17.38■□□□□ 0.37
PABPC1-215ENST00000520804 SNUPNO95149 360 aaKnown RBP17.38■□□□□ 0.37
PABPC1-215ENST00000520804 COX5AP20674 150 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 RPL14P50914 215 aaKnown RBP17.38■□□□□ 0.37
PABPC1-215ENST00000520804 CSNK2A1P68400 391 aaPredicted RBP17.38■□□□□ 0.37
PABPC1-215ENST00000520804 PPP2R2BQ00005 443 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 FUT5Q11128 374 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 STK11Q15831 433 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 KRT71Q3SY84 523 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 SAXO2Q658L1 398 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 TNFAIP8L2Q6P589 184 aaPredicted RBP17.38■□□□□ 0.37
PABPC1-215ENST00000520804 DNAJC14Q6Y2X3 702 aaPredicted RBP17.38■□□□□ 0.37
PABPC1-215ENST00000520804 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.38■□□□□ 0.37
PABPC1-215ENST00000520804 GALNT5Q7Z7M9 940 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 VPS37AQ8NEZ2 397 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 KBTBD8Q8NFY9 601 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 RAB8BQ92930 207 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 ROPN1LQ96C74 230 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 TRMT61AQ96FX7 289 aaKnown RBP17.38■□□□□ 0.37
PABPC1-215ENST00000520804 SORT1Q99523 831 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 SAP130Q9H0E3 1048 aa17.38■□□□□ 0.37
PABPC1-215ENST00000520804 SSU72Q9NP77 194 aaKnown RBP17.38■□□□□ 0.37
PABPC1-215ENST00000520804 MAGED1Q9Y5V3 778 aaPredicted RBP17.38■□□□□ 0.37
PABPC1-215ENST00000520804 IGKV3D-15A0A087WSY6 115 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 IGHV1-2P23083 117 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 APOBEC1P41238 236 aaKnown RBP17.37■□□□□ 0.37
PABPC1-215ENST00000520804 SLC1A6P48664 564 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 CASP8Q14790 479 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 PDK3Q15120 406 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 PPA1Q15181 289 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 ETFDHQ16134 617 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 CLEC12BQ2HXU8 276 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 SPANXN4Q5MJ08 99 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 TIMM23BQ5SRD1 257 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 ABLIM2Q6H8Q1 611 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 FRRS1Q6ZNA5 592 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 MTDHQ86UE4 582 aaKnown RBP17.37■□□□□ 0.37
PABPC1-215ENST00000520804 ZNF100Q8IYN0 542 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 LRRC34Q8IZ02 419 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 MREGQ8N565 214 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 ZNF563Q8TA94 476 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 NEURL3Q96EH8 262 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 CCDC106Q9BWC9 280 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 TRIM2Q9C040 744 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 CTPS2Q9NRF8 586 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 HAO1Q9UJM8 370 aa17.37■□□□□ 0.37
PABPC1-215ENST00000520804 SPIN1Q9Y657 262 aaPredicted RBP17.37■□□□□ 0.37
PABPC1-215ENST00000520804 A0A1W2PP18 115 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 TM9SF1O15321 606 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 RGS16O15492 202 aaPredicted RBP17.36■□□□□ 0.37
PABPC1-215ENST00000520804 DHRS4L1P0CG22 281 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 TFPIP10646 304 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 LBPP18428 481 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 KHKP50053 298 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 CLNS1AP54105 237 aaKnown RBP17.36■□□□□ 0.37
PABPC1-215ENST00000520804 VEZF1Q14119 521 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 DPY19L1Q2PZI1 675 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 PGGHGQ32M88 737 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 SSX8Q7RTT4 187 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 GRINAQ7Z429 371 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 P2RY8Q86VZ1 359 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 GTPBP3Q969Y2 492 aaKnown RBP17.36■□□□□ 0.37
PABPC1-215ENST00000520804 ZG16BQ96DA0 208 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 MUCL1Q96DR8 90 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 NUF2Q9BZD4 464 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 EXOSC3Q9NQT5 275 aaKnown RBP17.36■□□□□ 0.37
PABPC1-215ENST00000520804 EMC3Q9P0I2 261 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 MARCOQ9UEW3 520 aaPredicted RBP17.36■□□□□ 0.37
PABPC1-215ENST00000520804 CHRNA9Q9UGM1 479 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 LIPT1Q9Y234 373 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 ZANQ9Y493 2812 aa17.36■□□□□ 0.37
PABPC1-215ENST00000520804 HIVEP2P31629 2446 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 PRAMEF27A3QJZ7 478 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 PGM3O95394 542 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 PMS2P2O95744 297 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 GGT1P19440 569 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 RYKP34925 604 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 IDUAP35475 653 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 CHI3L1P36222 383 aaPredicted RBP17.35■□□□□ 0.37
PABPC1-215ENST00000520804 CDKN1AP38936 164 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 KCNJ10P78508 379 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 PLAURQ03405 335 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 CHRNEQ04844 493 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 KIRREL3Q8IZU9 778 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 ZHX1-C8orf76Q96EF9 292 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 SLC35A5Q9BS91 424 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.35■□□□□ 0.37
PABPC1-215ENST00000520804 HDGFL3Q9Y3E1 203 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 CSPG4Q6UVK1 2322 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 TLN2Q9Y4G6 2542 aa17.35■□□□□ 0.37
PABPC1-215ENST00000520804 OR5H1A6NKK0 313 aa17.34■□□□□ 0.37
PABPC1-215ENST00000520804 ZNF716A6NP11 495 aa17.34■□□□□ 0.37
PABPC1-215ENST00000520804 KIAA1324LA8MWY0 1029 aaPredicted RBP17.34■□□□□ 0.37
PABPC1-215ENST00000520804 RNF223E7ERA6 249 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms