RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 ZNF304Q9HCX3 659 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 EVA1BQ9NVM1 165 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 KLRF1Q9NZS2 232 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 PCDHGA3Q9Y5H0 932 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 AHSA1O95433 338 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 CLUP10909 449 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 PEPDP12955 493 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 CAPZBP47756 277 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 OMPP47874 163 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 TAS2R43P59537 309 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 CDK5Q00535 292 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 NRARPQ7Z6K4 114 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ZAR1Q86SH2 424 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 TMEM99Q8N816 258 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 THAP4Q8WY91 577 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 HLA-CQ95604 372 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 TSLPQ969D9 159 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 JSRP1Q96MG2 331 aaPredicted RBP9.38□□□□□ -0.91
MCF2-209ENST00000520602 ZNF350Q9GZX5 532 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 CPNE5Q9HCH3 593 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ENAMQ9NRM1 1142 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 GPN3Q9UHW5 284 aaPredicted RBP9.38□□□□□ -0.91
MCF2-209ENST00000520602 LAMP5Q9UJQ1 280 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ZNF222Q9UK12 451 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 PCOLCE2Q9UKZ9 415 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ADAM18Q9Y3Q7 739 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 COL4A4P53420 1690 aaPredicted RBP9.38□□□□□ -0.91
MCF2-209ENST00000520602 A0A087WV62 115 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 H7C1C5 153 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 SURF4O15260 269 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 FLRT2O43155 660 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 SEMA7AO75326 666 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 KHDRBS3O75525 346 aaKnown RBP9.38□□□□□ -0.91
MCF2-209ENST00000520602 SULT1C4O75897 302 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 PTTG1O95997 202 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ATP1B1P05026 303 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 CTSBP07858 339 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 TACSTD2P09758 323 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 GABRA5P31644 462 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 AQP2P41181 271 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 LCN6P62502 163 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 OXA1LQ15070 435 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 TAF13Q15543 124 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 ALG10Q5BKT4 473 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 RPTNQ6XPR3 784 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 SYT13Q7L8C5 426 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 LINGO2Q7L985 606 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 OR4C3Q8NH37 302 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 TEAD3Q99594 435 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 TTYH2Q9BSA4 534 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 CCDC32Q9BV29 185 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 TAPBPLQ9BX59 468 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 FGF21Q9NSA1 209 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 CENPMQ9NSP4 180 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 MAN2C1Q9NTJ4 1040 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 MED17Q9NVC6 651 aa9.38□□□□□ -0.91
MCF2-209ENST00000520602 HRKO00198 91 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 CHP2O43745 196 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 BRINP1O60477 761 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 PRKCAP17252 672 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 PRICKLE4Q2TBC4 344 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 ZNF613Q6PF04 617 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 NSMAFQ92636 917 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 TMEM74BQ9NUR3 256 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 BAIAP2Q9UQB8 552 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 GRIP1Q9Y3R0 1128 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 IGHV3-20A0A0C4DH32 117 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 IGHV5-51A0A0C4DH38 117 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 ANXA2P2A6NMY6 339 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 EEF1E1O43324 174 aaKnown RBP9.37□□□□□ -0.91
MCF2-209ENST00000520602 ANXA2P07355 339 aaKnown RBP9.37□□□□□ -0.91
MCF2-209ENST00000520602 APEX1P27695 318 aaKnown RBP9.37□□□□□ -0.91
MCF2-209ENST00000520602 SHC1P29353 583 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 HSD11B2P80365 405 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 C14orf28Q4W4Y0 310 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 ACSM3Q53FZ2 586 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 NUP54Q7Z3B4 507 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 CADM3Q8N126 398 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.37□□□□□ -0.91
MCF2-209ENST00000520602 SLC25A19Q9HC21 320 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 RXFP3Q9NSD7 469 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 NDUFB11Q9NX14 153 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 IL20Q9NYY1 176 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 NLKQ9UBE8 527 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 AK6Q9Y3D8 172 aaKnown RBP9.37□□□□□ -0.91
MCF2-209ENST00000520602 MTCH2Q9Y6C9 303 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 ASXL3Q9C0F0 2248 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 TMEM129A0AVI4 362 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 DSCR3O14972 297 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 HCRTR1O43613 425 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 IL7P13232 177 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 RPS5P46782 204 aaKnown RBP9.37□□□□□ -0.91
MCF2-209ENST00000520602 EIF1AXP47813 144 aaKnown RBP9.37□□□□□ -0.91
MCF2-209ENST00000520602 FABP5Q01469 135 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 ZNF440Q8IYI8 595 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 LRRC17Q8N6Y2 441 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 CELF2-AS1Q8N7Q2 184 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 ZBTB8BQ8NAP8 495 aaPredicted RBP9.37□□□□□ -0.91
MCF2-209ENST00000520602 OR10H5Q8NGA6 315 aa9.37□□□□□ -0.91
MCF2-209ENST00000520602 TM9SF4Q92544 642 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms