RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 SAMD8Q96LT4 415 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 TOLLIPQ9H0E2 274 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 PTTG3PQ9NZH4 202 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 PHIPQ8WWQ0 1821 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 SLC43A1O75387 559 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 APEX1P27695 318 aaKnown RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 OR4K13Q8NH42 304 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 LGALS14Q8TCE9 139 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 BORCS7Q96B45 105 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 ZBTB8AQ96BR9 441 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 C1orf74Q96LT6 269 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 C5AR2Q9P296 337 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 S1PR4O95977 384 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 HOXB9P17482 250 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 NDUFV2P19404 249 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 MALLQ13021 153 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 DOC2AQ14183 400 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 FAM58AQ8N1B3 248 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 GGHQ92820 318 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 SHDQ96IW2 340 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 SFXN2Q96NB2 322 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 ACSS1Q9NUB1 689 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 TMEM100Q9NV29 134 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 LRP5LA4QPB2 252 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 RTCAO00442 366 aaKnown RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 SOCS6O14544 535 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 C1GALT1C1LP0DN25 315 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 OR4N5Q8IXE1 308 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 NPWQ8N729 165 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 RCBTB1Q8NDN9 531 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 ZNF689Q96CS4 500 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 SGIP1Q9BQI5 828 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 SLC22A11Q9NSA0 550 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 FBXL4Q9UKA2 621 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 ZNF175Q9Y473 711 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 DIRAS3O95661 229 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 PTHP01270 115 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 C6P13671 934 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 GIPRP48546 466 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 RIDAP52758 137 aaKnown RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 SRYQ05066 204 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 LEG1Q6P5S2 330 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 B3GNT9Q6UX72 402 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 OR56B4Q8NH76 319 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 OR1S1Q8NH92 325 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 ZNF559Q9BR84 538 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 HINT2Q9BX68 163 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 SLC16A5O15375 505 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 SH3BP2P78314 561 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 MRPL49Q13405 166 aaKnown RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 UEVLDQ8IX04 471 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 LRRC15Q8TF66 581 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 OR5P2Q8WZ92 322 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 IRF7Q92985 503 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 C12orf42Q96LP6 360 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 NUDT9Q9BW91 350 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 C8orf33Q9H7E9 229 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 USP36Q9P275 1121 aaKnown RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 ARSAP15289 507 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 GCAP28676 217 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 TAS2R20P59543 309 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 RPS15AP62244 130 aaKnown RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 COL13A1Q5TAT6 717 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 TRAPPC6BQ86SZ2 158 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 REM2Q8IYK8 340 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 BSCL2Q96G97 398 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-206ENST00000520002 INIPQ9NRY2 104 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 KCMF1Q9P0J7 381 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 NAALAD2Q9Y3Q0 740 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 TMEM14AQ9Y6G1 99 aa8.18□□□□□ -1.1
CSMD1-206ENST00000520002 SLC22A31A6NKX4 558 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 CA12O43570 354 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 LAMP1P11279 417 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 SHC2P98077 582 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 SLC38A6Q8IZM9 456 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 HORMAD2Q8N7B1 307 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 ANKK1Q8NFD2 765 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 URM1Q9BTM9 101 aaKnown RBP8.17□□□□□ -1.1
CSMD1-206ENST00000520002 RNF167Q9H6Y7 350 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 FAM221BA6H8Z2 402 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 D6RAR5 112 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 CYB5BO43169 146 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 SEC14L2O76054 403 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 CCL5P13501 91 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 RAP1AP62834 184 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 LRFN4Q6PJG9 635 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 LRRC28Q86X40 367 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-206ENST00000520002 LSMEM1Q8N8F7 131 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 A0A0A6YYJ9 748 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 DVL2O14641 736 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 FZD7O75084 574 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 LRP10Q7Z4F1 713 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 ZMYND19Q96E35 227 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-206ENST00000520002 ZNF578Q96N58 590 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-206ENST00000520002 C20orf85Q9H1P6 137 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 RBFOX1Q9NWB1 397 aaKnown RBP8.17□□□□□ -1.1
CSMD1-206ENST00000520002 NDRG3Q9UGV2 375 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 C1QBP02746 253 aa8.17□□□□□ -1.1
CSMD1-206ENST00000520002 SNRPBP14678 240 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms