RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CXorf56Q9H5V9 222 aa11.02□□□□□ -0.65
CSMD1-205ENST00000519623 POLE3Q9NRF9 147 aa11.02□□□□□ -0.65
CSMD1-205ENST00000519623 PNPOQ9NVS9 261 aa11.02□□□□□ -0.65
CSMD1-205ENST00000519623 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.02□□□□□ -0.65
CSMD1-205ENST00000519623 LAMP3Q9UQV4 416 aa11.02□□□□□ -0.65
CSMD1-205ENST00000519623 RNF115Q9Y4L5 304 aa11.02□□□□□ -0.65
CSMD1-205ENST00000519623 V9GYY5 206 aaPredicted RBP11.02□□□□□ -0.65
CSMD1-205ENST00000519623 TM9SF1O15321 606 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 SNUPNO95149 360 aaKnown RBP11.01□□□□□ -0.65
CSMD1-205ENST00000519623 AGR2O95994 175 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 CD3EP07766 207 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 SOD3P08294 240 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 LBPP18428 481 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 BGNP21810 368 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 DIO1P49895 249 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 ATP5J2P56134 94 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 PLAURQ03405 335 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 SPANXN4Q5MJ08 99 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 ATAD3BQ5T9A4 648 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 TNFAIP8L2Q6P589 184 aaPredicted RBP11.01□□□□□ -0.65
CSMD1-205ENST00000519623 DNAJC14Q6Y2X3 702 aaPredicted RBP11.01□□□□□ -0.65
CSMD1-205ENST00000519623 FRRS1Q6ZNA5 592 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 MTDHQ86UE4 582 aaKnown RBP11.01□□□□□ -0.65
CSMD1-205ENST00000519623 ADGRG3Q86Y34 549 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 LRRC34Q8IZ02 419 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 VPS37AQ8NEZ2 397 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 OIT3Q8WWZ8 545 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 NEUROG1Q92886 237 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 ROPN1LQ96C74 230 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 TEX37Q96LM6 180 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 CCDC106Q9BWC9 280 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 NUF2Q9BZD4 464 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 ESRP2Q9H6T0 727 aaKnown RBP11.01□□□□□ -0.65
CSMD1-205ENST00000519623 MEAF6Q9HAF1 191 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 NGBQ9NPG2 151 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 SERINC1Q9NRX5 453 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 SLC35A3Q9Y2D2 325 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 WDR45Q9Y484 360 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 ALPK2Q86TB3 2170 aa11.01□□□□□ -0.65
CSMD1-205ENST00000519623 PLCE1Q9P212 2302 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 IGKV3D-15A0A087WSY6 115 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 CLDN24A6NM45 220 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 SULT2B1O00204 365 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 HMGN4O00479 90 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 CLOCKO15516 846 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 ADAM11O75078 769 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 LYZL6O75951 148 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 PGM3O95394 542 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 FESP07332 822 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 ALDOCP09972 364 aaKnown RBP11□□□□□ -0.65
CSMD1-205ENST00000519623 IGHV1-2P23083 117 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 NTF4P34130 210 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 RYKP34925 604 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 APOBEC1P41238 236 aaKnown RBP11□□□□□ -0.65
CSMD1-205ENST00000519623 CLNS1AP54105 237 aaKnown RBP11□□□□□ -0.65
CSMD1-205ENST00000519623 KCNJ10P78508 379 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 CHRNEQ04844 493 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 BSPH1Q075Z2 132 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 STX3Q13277 289 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 TNK1Q13470 666 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 PDK3Q15120 406 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 FAM174BQ3ZCQ3 159 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 ZNF672Q499Z4 452 aaPredicted RBP11□□□□□ -0.65
CSMD1-205ENST00000519623 SYT14P1Q58G82 188 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 OGFOD2Q6N063 350 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 ZC3HAV1Q7Z2W4 902 aaKnown RBP11□□□□□ -0.65
CSMD1-205ENST00000519623 GALNT5Q7Z7M9 940 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 HMGN2P46Q86SG4 172 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 SMAP2Q8WU79 429 aaPredicted RBP11□□□□□ -0.65
CSMD1-205ENST00000519623 SLC25A43Q8WUT9 341 aaPredicted RBP11□□□□□ -0.65
CSMD1-205ENST00000519623 FBXW5Q969U6 566 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 ARL5BQ96KC2 179 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 CCDC115Q96NT0 180 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 POTEKPQ9BYX7 375 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 TRIM2Q9C040 744 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 CTPS2Q9NRF8 586 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 BTNL2Q9UIR0 455 aa11□□□□□ -0.65
CSMD1-205ENST00000519623 ZNF716A6NP11 495 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 E9PBE3 544 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 RAMP1O60894 148 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 THBS1P07996 1170 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 TFPIP10646 304 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 COX5AP20674 150 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 IL12AP29459 219 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 S100A3P33764 101 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 UFM1P61960 85 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 RPS4XP62701 263 aaKnown RBP10.99□□□□□ -0.65
CSMD1-205ENST00000519623 CSNK2A1P68400 391 aaPredicted RBP10.99□□□□□ -0.65
CSMD1-205ENST00000519623 BST1Q10588 318 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 DPY19L1Q2PZI1 675 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 PGGHGQ32M88 737 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 ABLIM2Q6H8Q1 611 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 PRIMA1Q86XR5 153 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 RNF130Q86XS8 419 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 ZNF100Q8IYN0 542 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 ZNF433Q8N7K0 673 aaPredicted RBP10.99□□□□□ -0.65
CSMD1-205ENST00000519623 ANKFN1Q8N957 763 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 CNOT9Q92600 299 aaKnown RBP10.99□□□□□ -0.65
CSMD1-205ENST00000519623 ZBTB9Q96C00 473 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 SLC35A5Q9BS91 424 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms