RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 NXF5Q9H1B4 397 aaKnown RBP3.93□□□□□ -1.78
PTPN12-213ENST00000519553 ZNF331Q9NQX6 463 aaPredicted RBP3.93□□□□□ -1.78
PTPN12-213ENST00000519553 MMP26Q9NRE1 261 aa3.93□□□□□ -1.78
PTPN12-213ENST00000519553 BTNL2Q9UIR0 455 aa3.93□□□□□ -1.78
PTPN12-213ENST00000519553 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
PTPN12-213ENST00000519553 NPIPA7E9PJI5 369 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 SNAPINO95295 136 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 NPIPA8P0DM63 369 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 POLR2FP61218 127 aaKnown RBP3.92□□□□□ -1.78
PTPN12-213ENST00000519553 CSNK1G2P78368 415 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 KLF17Q5JT82 389 aaPredicted RBP3.92□□□□□ -1.78
PTPN12-213ENST00000519553 ACOT7LQ6ZUV0 252 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 MTURNQ8N3F0 131 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 ZNF740Q8NDX6 193 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 RPUSD4Q96CM3 377 aaKnown RBP3.92□□□□□ -1.78
PTPN12-213ENST00000519553 CCNL2Q96S94 520 aaPredicted RBP3.92□□□□□ -1.78
PTPN12-213ENST00000519553 SMYD3Q9H7B4 428 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 ELOVL3Q9HB03 270 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 SLC35D1Q9NTN3 355 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 NUDT15Q9NV35 164 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 PRO0461Q9UI25 63 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 LAMP5Q9UJQ1 280 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 NPIPA1Q9UND3 350 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 PRG3Q9Y2Y8 225 aaPredicted RBP3.92□□□□□ -1.78
PTPN12-213ENST00000519553 KIF3AQ9Y496 699 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 SLCO1B1Q9Y6L6 691 aa3.92□□□□□ -1.78
PTPN12-213ENST00000519553 IGKV6D-21A0A0A0MT36 114 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 E7ESA3 106 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 BTN3A3O00478 584 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 RS1O15537 224 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 BCAS1O75363 584 aaPredicted RBP3.91□□□□□ -1.78
PTPN12-213ENST00000519553 PRB2P02812 416 aaPredicted RBP3.91□□□□□ -1.78
PTPN12-213ENST00000519553 KRT8P05787 483 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 PSG2P11465 335 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 UQCRC2P22695 453 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 RPS14P62263 151 aaKnown RBP3.91□□□□□ -1.78
PTPN12-213ENST00000519553 SELPLGQ14242 412 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 SYPL1Q16563 259 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 HSP90AA5PQ58FG0 334 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 GPRC6AQ5T6X5 926 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 BLOC1S2Q6QNY1 142 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 SYT10Q6XYQ8 523 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 STXBP6Q8NFX7 210 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 OR4D9Q8NGE8 314 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 TCTEX1D2Q8WW35 142 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 RDH5Q92781 318 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 FAM104AQ969W3 186 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 NRTNQ99748 197 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 TBK1Q9UHD2 729 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 AK6Q9Y3D8 172 aaKnown RBP3.91□□□□□ -1.78
PTPN12-213ENST00000519553 OR10H1Q9Y4A9 318 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 NEUROG3Q9Y4Z2 214 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 CDC42BPBQ9Y5S2 1711 aa3.91□□□□□ -1.78
PTPN12-213ENST00000519553 BICDL2A1A5D9 508 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 A8MUA0 341 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 TAPBPO15533 448 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 RBMY1CP0DJD4 496 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 KRT13P13646 458 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 FGF9P31371 208 aaPredicted RBP3.9□□□□□ -1.79
PTPN12-213ENST00000519553 PTGDSP41222 190 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 UCNP55089 124 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 HSD17B7P56937 341 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 MECOMQ03112 1051 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 TRIM16LQ309B1 348 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 SLC25A52Q3SY17 297 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 TP53I3Q53FA7 332 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 C1orf146Q5VVC0 180 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 MOB3BQ86TA1 216 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 NKAPP1Q8N9T2 125 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 MRPS31Q92665 395 aaKnown RBP3.9□□□□□ -1.79
PTPN12-213ENST00000519553 DTNBP1Q96EV8 351 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 C16orf45Q96MC5 204 aaPredicted RBP3.9□□□□□ -1.79
PTPN12-213ENST00000519553 AMDHD1Q96NU7 426 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 MBOAT4Q96T53 435 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 SDHCQ99643 169 aaPredicted RBP3.9□□□□□ -1.79
PTPN12-213ENST00000519553 KIF25Q9UIL4 384 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 PHF11Q9UIL8 331 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 LTBP1Q14766 1721 aa3.9□□□□□ -1.79
PTPN12-213ENST00000519553 A8MUI8 341 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 GFYI3L273 518 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 CXCL13O43927 109 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 LGI1O95970 557 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 IGHG4P01861 327 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 PCCBP05166 539 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 P2RY1P47900 373 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 HLCSP50747 726 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 DAP3P51398 398 aaKnown RBP3.89□□□□□ -1.79
PTPN12-213ENST00000519553 NSDHLQ15738 373 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 MPPED2Q15777 294 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 SLC36A3Q495N2 470 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 DNAJC21Q5F1R6 531 aaKnown RBP3.89□□□□□ -1.79
PTPN12-213ENST00000519553 CASC10Q5T4H9 136 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 ATL3Q6DD88 541 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 Q6P435 159 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 RNF165Q6ZSG1 346 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 RFLNAQ6ZTI6 216 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 ZDHHC21Q8IVQ6 265 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 GPATCH11Q8N954 259 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 PELI1Q96FA3 418 aa3.89□□□□□ -1.79
PTPN12-213ENST00000519553 OMDQ99983 421 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms