RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 GLRX2Q9NS18 164 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 CCM2LQ9NUG4 571 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-215ENST00000519474 ACER3Q9NUN7 267 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 MCTS1Q9ULC4 181 aaKnown RBP8.35□□□□□ -1.07
HDAC3-215ENST00000519474 PROCRQ9UNN8 238 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 WDR45Q9Y484 360 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 USH1CQ9Y6N9 552 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 PRRC2AP48634 2157 aaKnown RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 A0A1W2PNR3 127 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 C16orf97H3BN30 126 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 CASQ2O14958 399 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 SIAH2O43255 324 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ADAM11O75078 769 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 SS18L1O75177 396 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ATP6V1G1O75348 118 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 H6PDO95479 791 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 CHRM4P08173 479 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 UBTFL6P0CB48 400 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ZCCHC18P0CG32 403 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 POU2F1P14859 743 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 RPS2P15880 293 aaKnown RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ME2P23368 584 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ELK4P28324 431 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 UGT2B10P36537 528 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 IDH3AP50213 366 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 POLR2JP52435 117 aaKnown RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 RAC3P60763 192 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 LRRC74AQ0VAA2 488 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 CBFBQ13951 182 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 TIGD2Q4W5G0 525 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 GPAT3Q53EU6 434 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 THOC7Q6I9Y2 204 aaKnown RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 LRRC74BQ6ZQY2 392 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 EIF3MQ7L2H7 374 aaKnown RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 NUFIP2Q7Z417 695 aaKnown RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 HMGN2P46Q86SG4 172 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 JAZF1Q86VZ6 243 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ADGRG3Q86Y34 549 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 FUNDC1Q8IVP5 155 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 LINC00469Q8N7U9 141 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 FAM71CQ8NEG0 241 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 OR6K3Q8NGY3 331 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 OIT3Q8WWZ8 545 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 CNOT9Q92600 299 aaKnown RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 C7orf26Q96N11 449 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 TRNT1Q96Q11 434 aaKnown RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ZBTB18Q99592 522 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 COQ10BQ9H8M1 238 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 SLC52A3Q9NQ40 469 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ARGLU1Q9NWB6 273 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ZIM2Q9NZV7 527 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ST6GALNAC2Q9UJ37 374 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 LIPT1Q9Y234 373 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 ADGRG4Q8IZF6 3080 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 CENPEQ02224 2701 aa8.34□□□□□ -1.07
HDAC3-215ENST00000519474 AGAP5A6NIR3 686 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 DEFB108AA8MXU0 73 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 HNRNPCL2B2RXH8 293 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 RFXANKO14593 260 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 POLR3GO15318 223 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-215ENST00000519474 KIAA0513O60268 411 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 HNRNPCL1O60812 293 aaKnown RBP8.33□□□□□ -1.08
HDAC3-215ENST00000519474 ZNF254O75437 659 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 PRKD3O94806 890 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 GOSR1O95249 250 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 TGDSO95455 350 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 S100A6P06703 90 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 TFPTP0C1Z6 253 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 TROVE2P10155 538 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC3-215ENST00000519474 FCGR2AP12318 317 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 CD1EP15812 388 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 PGCP20142 388 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 KLK2P20151 261 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 RYKP34925 604 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 CPOXP36551 454 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 MRPL19P49406 292 aaKnown RBP8.33□□□□□ -1.08
HDAC3-215ENST00000519474 KHKP50053 298 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 ART1P52961 327 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 CTBP2P56545 445 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 ROR2Q01974 943 aaKnown RBP8.33□□□□□ -1.08
HDAC3-215ENST00000519474 ZNF239Q16600 458 aaKnown RBP8.33□□□□□ -1.08
HDAC3-215ENST00000519474 GTDC1Q4AE62 458 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 PPP4R4Q6NUP7 873 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 STAC2Q6ZMT1 411 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 TMPPEQ6ZT21 453 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 PLEKHM3Q6ZWE6 761 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 ZNF550Q7Z398 422 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 TUSC5Q8IXB3 177 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 TRIML2Q8N7C3 387 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 OR9I1Q8NGQ6 314 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 LILRB1Q8NHL6 650 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-215ENST00000519474 PNPT1Q8TCS8 783 aaKnown RBP8.33□□□□□ -1.08
HDAC3-215ENST00000519474 ABHD3Q8WU67 409 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 ST8SIA1Q92185 356 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 GTF2H4Q92759 462 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 NINJ1Q92982 152 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 CPNE4Q96A23 557 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-215ENST00000519474 VPS33AQ96AX1 596 aa8.33□□□□□ -1.08
HDAC3-215ENST00000519474 EBF4Q9BQW3 602 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms