RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 RGNQ15493 299 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 INPP5JQ15735 1006 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 TMEM31Q5JXX7 168 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 OTUD3Q5T2D3 398 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 GCNT6Q5T4J0 391 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 ANXA8L1Q5VT79 327 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 KHDRBS2Q5VWX1 349 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 HIST2H2AA3Q6FI13 130 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 LAIR2Q6ISS4 152 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 TEX38Q6PEX7 206 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 SPESP1Q6UW49 350 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 ZNF621Q6ZSS3 439 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 EIF3MQ7L2H7 374 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 TSEN54Q7Z6J9 526 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 MRGPRGQ86SM5 289 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 GLRX5Q86SX6 157 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 LDLRAD3Q86YD5 345 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 ANKRD13BQ86YJ7 626 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 PLD3Q8IV08 490 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 ZDHHC21Q8IVQ6 265 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 ZNF786Q8N393 782 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 SVOPLQ8N434 492 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 DHRSXQ8N5I4 330 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 TMCO5AQ8N6Q1 288 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 AMER3Q8N944 861 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 DENND6BQ8NEG7 585 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 OR52E1Q8NGJ3 308 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 OR2L8Q8NGY9 312 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 OR5K1Q8NHB7 308 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 MAGEE2Q8TD90 523 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 GANCQ8TET4 914 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 MAL2Q969L2 176 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 TAMM41Q96BW9 452 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 RDH12Q96NR8 316 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 DACH2Q96NX9 599 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 OR2M4Q96R27 311 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 F2RL3Q96RI0 385 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 SIGLEC11Q96RL6 698 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 AIF1LQ9BQI0 150 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 SLC35A5Q9BS91 424 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 APOOQ9BUR5 198 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 TRPM6Q9BX84 2022 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 OSBPL10Q9BXB5 764 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 POLDIP3Q9BY77 421 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 SLC17A9Q9BYT1 436 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 PCBD2Q9H0N5 130 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 NT5DC2Q9H857 520 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 SIRT3Q9NTG7 399 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 IMP3Q9NV31 184 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 CHCHD3Q9NX63 227 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 TEX10Q9NXF1 929 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 SPHK1Q9NYA1 384 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 ZNF282Q9UDV7 671 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 ACSL5Q9ULC5 683 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 SAMD4AQ9UPU9 718 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 MYRFQ9Y2G1 1151 aa4.42□□□□□ -1.7
CTNNA1-212ENST00000518919 MYO9BQ13459 2157 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 CROCCQ5TZA2 2017 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 XIRP2A4UGR9 3374 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 A0A0A6YYD5 115 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 A0A0G2JN53 185 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 A0A1W2PPC1 479 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 TMEM8BA6NDV4 472 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 GAGE12JA6NER3 117 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 CGB1A6NKQ9 187 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 PDZK1P1A8MUH7 402 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 E9PQ18 207 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 G3V2T6 193 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 hCG_2039718K7EN88 272 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 CACNB4O00305 520 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 SLC31A1O15431 190 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 LCMT2O60294 686 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 PRKRAO75569 313 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 DIRAS1O95057 198 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 BMP10O95393 424 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 OPN1SWP03999 348 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 FABP3P05413 133 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 ADRB1P08588 477 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 HOXC4P09017 264 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 ELK4P28324 431 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 AQP1P29972 269 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 SOAT1P35610 550 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 RPL3P39023 403 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 FRKP42685 505 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 YAP1P46937 504 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 CDK9P50750 372 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 BMXP51813 675 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 CAPZA1P52907 286 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 MAPK12P53778 367 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 CASP9P55211 416 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 KCNJ10P78508 379 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 C2orf80Q0P641 193 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 LRRC74AQ0VAA2 488 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 SGCGQ13326 291 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 VEZF1Q14119 521 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 ZIC1Q15915 447 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 ZNF674Q2M3X9 581 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 CTU2Q2VPK5 515 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 CEP78Q5JTW2 689 aa4.41□□□□□ -1.7
CTNNA1-212ENST00000518919 CCNYL2Q5T2Q4 361 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms