RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 MAGEA8P43361 318 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 EPS8Q12929 822 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 FADDQ13158 208 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 ADRM1Q16186 407 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 RUNDC3AQ59EK9 446 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 C3orf33Q6P1S2 294 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 TUSC5Q8IXB3 177 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 PEX5LQ8IYB4 626 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 OIT3Q8WWZ8 545 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 TMEM234Q8WY98 164 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 ZNF775Q96BV0 537 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-219ENST00000518824 GMPPAQ96IJ6 420 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-219ENST00000518824 WFDC6Q9BQY6 131 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 CCDC134Q9H6E4 229 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 C12orf49Q9H741 205 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 FOXD3Q9UJU5 478 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-219ENST00000518824 OSGIN1Q9UJX0 560 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 ANKHD1Q8IWZ3 2542 aaKnown RBP11.87□□□□□ -0.51
VEGFA-219ENST00000518824 PRR14LQ5THK1 2151 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 HRNRQ86YZ3 2850 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-219ENST00000518824 TMED7-TICAM2A0A0A6YYA0 188 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 A0A0G2JPF8 293 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 FAM221AA4D161 298 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 CFAP73A6NFT4 308 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 HNRNPCL2B2RXH8 293 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 HNRNPCL3B7ZW38 293 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 TPST1O60507 370 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 HNRNPCL1O60812 293 aaKnown RBP11.86□□□□□ -0.51
VEGFA-219ENST00000518824 HNRNPCL4P0DMR1 293 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 TFPIP10646 304 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 CD8BP10966 210 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 FCGR2AP12318 317 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 GPX2P18283 190 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 TACR3P29371 465 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 SLC7A1P30825 629 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 MDH1P40925 334 aaKnown RBP11.86□□□□□ -0.51
VEGFA-219ENST00000518824 DIO1P49895 249 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 ARFIP2P53365 341 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 MTPNP58546 118 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 CAPRIN1Q14444 709 aaKnown RBP11.86□□□□□ -0.51
VEGFA-219ENST00000518824 POU4F3Q15319 338 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 EXOC3L2Q2M3D2 409 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 SYT14P1Q58G82 188 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 PDSS1Q5T2R2 415 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 GCNT6Q5T4J0 391 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 ANKRD34AQ69YU3 496 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 TMPPEQ6ZT21 453 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 FCRLAQ7L513 359 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.86□□□□□ -0.51
VEGFA-219ENST00000518824 ZNF550Q7Z398 422 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 GRINAQ7Z429 371 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 DHDDSQ86SQ9 333 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 SERPINA11Q86U17 422 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 TMEM200AQ86VY9 491 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 PTOV1Q86YD1 416 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 CMIPQ8IY22 773 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 DPP10Q8N608 796 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 CPNE4Q96A23 557 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-219ENST00000518824 WFIKKN1Q96NZ8 548 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 ZNF317Q96PQ6 595 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-219ENST00000518824 ZNF300Q96RE9 604 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-219ENST00000518824 SLC39A3Q9BRY0 314 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 PRR14Q9BWN1 585 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 BCL2L10Q9HD36 194 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 SAR1AQ9NR31 198 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 PLSCR4Q9NRQ2 329 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 TMEM45AQ9NWC5 275 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 PAQR5Q9NXK6 330 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-219ENST00000518824 CHRNA9Q9UGM1 479 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 LEF1Q9UJU2 399 aaPredicted RBP11.86□□□□□ -0.51
VEGFA-219ENST00000518824 PROCRQ9UNN8 238 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 TRIM33Q9UPN9 1127 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 NDUFAF1Q9Y375 327 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 TMED7Q9Y3B3 224 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 GMEB1Q9Y692 573 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 TACC2O95359 2948 aa11.86□□□□□ -0.51
VEGFA-219ENST00000518824 GJE1A6NN92 205 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 A6NNC1 897 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 SIAH2O43255 324 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 GCM2O75603 506 aaPredicted RBP11.85□□□□□ -0.51
VEGFA-219ENST00000518824 PLGP00747 810 aaPredicted RBP11.85□□□□□ -0.51
VEGFA-219ENST00000518824 FESP07332 822 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 PABPC4LP0CB38 370 aaKnown RBP11.85□□□□□ -0.51
VEGFA-219ENST00000518824 TROVE2P10155 538 aaKnown RBP eCLIP11.85□□□□□ -0.51
VEGFA-219ENST00000518824 EPXP11678 715 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 IMPDH2P12268 514 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 AQP1P29972 269 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 CD79BP40259 229 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 APOBEC1P41238 236 aaKnown RBP11.85□□□□□ -0.51
VEGFA-219ENST00000518824 CTBP2P56545 445 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 RAC3P60763 192 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 CDK6Q00534 326 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 SORDQ00796 357 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 BNIP2Q12982 314 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 KLF10Q13118 480 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 TSC22D1Q15714 1073 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 LIN52Q52LA3 116 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 HSP90B2PQ58FF3 399 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms