RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 SH3YL1Q96HL8 342 aaPredicted RBP5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TMEM41AQ96HV5 264 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 NSL1Q96IY1 281 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 KIRREL1Q96J84 757 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CLPTM1LQ96KA5 538 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ZNF597Q96LX8 424 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TRNT1Q96Q11 434 aaKnown RBP5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 HOPXQ9BPY8 73 aaPredicted RBP5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SYT3Q9BQG1 590 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CPPED1Q9BRF8 314 aaPredicted RBP5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 RTN4RQ9BZR6 473 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 IKZF5Q9H5V7 419 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 PTGES2Q9H7Z7 377 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 MTHFD2LQ9H903 347 aaPredicted RBP5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ARL8BQ9NVJ2 186 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ALKBH4Q9NXW9 302 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CALML5Q9NZT1 146 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 P2RX2Q9UBL9 471 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SEC14L3Q9UDX4 400 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ABCG2Q9UNQ0 655 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 L3MBTL1Q9Y468 752 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 DTNAQ9Y4J8 743 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 WIF1Q9Y5W5 379 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TLN1Q9Y490 2541 aaKnown RBP5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 LOC400499M0QZD8 3231 aa5.27□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SVILO95425 2214 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 A0A0G2JPF8 293 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 A0A1B0GTH9 108 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ANKUB1A6NFN9 424 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SERINC4A6NH21 518 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 LRRC3CA6NJW4 275 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 HNRNPCL2B2RXH8 293 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 HNRNPCL3B7ZW38 293 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 NPIPB9F8W1W9 429 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 H3BUI4 141 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 PYCARD-AS1I3L0S3 204 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 M0QX08 132 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ZNHIT1O43257 154 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ZNF264O43296 627 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 PIP5K1CO60331 668 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 HNRNPCL1O60812 293 aaKnown RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TMEM127O75204 238 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 UGT2B17O75795 530 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CBX6O95503 412 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 NUDT14O95848 222 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 DBIP07108 87 aaKnown RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 NGFRP08138 427 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CHRM4P08173 479 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 UBTFL6P0CB48 400 aaPredicted RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 HNRNPCL4P0DMR1 293 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 HOXB9P17482 250 aaPredicted RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 HK1P19367 917 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CTSSP25774 331 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 DPP4P27487 766 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 AQP1P29972 269 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CCR4P51679 360 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 GAS1P54826 345 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 PSME3P61289 254 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 RAB1AP62820 205 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 NKX6-1P78426 367 aaPredicted RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 KCNJ10P78508 379 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 CBX1P83916 185 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 HSF1Q00613 529 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 RBPJQ06330 500 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 FUT5Q11128 374 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SCARB2Q14108 478 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 LARS2Q15031 903 aaKnown RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 MAPK11Q15759 364 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ZNF141Q15928 474 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 MAPK14Q16539 360 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ZNF630Q2M218 657 aaPredicted RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 HYAL4Q2M3T9 481 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 EIF2S3LQ2VIR3 472 aaKnown RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 KLHL26Q53HC5 615 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 EIPR1Q53HC9 387 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 FNDC7Q5VTL7 733 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 ZNF324BQ6AW86 544 aaPredicted RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 REEP3Q6NUK4 255 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TRILQ7L0X0 811 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 EIF3MQ7L2H7 374 aaKnown RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SERPINA11Q86U17 422 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 YRDCQ86U90 279 aaKnown RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 STK32CQ86UX6 486 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 MISPQ8IVT2 679 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 SIAH3Q8IW03 269 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 GHDCQ8N2G8 530 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 C10orf111Q8N326 155 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 METTL25Q8N6Q8 603 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 C11orf65Q8NCR3 313 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 OR8J3Q8NGG0 315 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 OR52P1PQ8NH57 321 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 OR14L1PQ8NHC6 308 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 RAB24Q969Q5 203 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 MIB2Q96AX9 1013 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 DTNBP1Q96EV8 351 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 GPR137Q96N19 417 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 DMRTA2Q96SC8 542 aa5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 BARD1Q99728 777 aaKnown RBP5.26□□□□□ -1.57
SCARNA6.1-201ENST00000516989 TREX2Q9BQ50 279 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms