RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 RAET1LQ5VY80 246 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 KLHDC7BQ96G42 594 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 ZDHHC12Q96GR4 267 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 NTMT1Q9BV86 223 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 HOXD1Q9GZZ0 328 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 USP22Q9UPT9 525 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 TPPPO94811 219 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 DAPP51397 102 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 TAS2R30P59541 319 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 RNF4P78317 190 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 GLO1Q04760 184 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 TMEM244Q5VVB8 128 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 GPR137CQ8N3F9 429 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 IL17RCQ8NAC3 791 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 SLC30A7Q8NEW0 376 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 OR9A2Q8NGT5 310 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 HHIPL1Q96JK4 782 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 EMC7Q9NPA0 242 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 IL17CQ9P0M4 197 aa12.46□□□□□ -0.41
TCOF1-214ENST00000515035 METTL15A6NJ78 407 aa12.46□□□□□ -0.42
TCOF1-214ENST00000515035 AP1G1O43747 822 aa12.46□□□□□ -0.42
TCOF1-214ENST00000515035 TECPR1Q7Z6L1 1165 aa12.46□□□□□ -0.42
TCOF1-214ENST00000515035 WDR92Q96MX6 357 aa12.46□□□□□ -0.42
TCOF1-214ENST00000515035 IL26Q9NPH9 171 aa12.46□□□□□ -0.42
TCOF1-214ENST00000515035 DMRT3Q9NQL9 472 aa12.46□□□□□ -0.42
TCOF1-214ENST00000515035 C1GALT1Q9NS00 363 aa12.46□□□□□ -0.42
TCOF1-214ENST00000515035 GMPR2Q9P2T1 348 aaKnown RBP12.46□□□□□ -0.42
TCOF1-214ENST00000515035 MROH6A6NGR9 719 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 SCG5P05408 212 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 ETV6P41212 452 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 RPS21P63220 83 aaKnown RBP12.45□□□□□ -0.42
TCOF1-214ENST00000515035 PLA2G7Q13093 441 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 RNF141Q8WVD5 230 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 BAZ2AQ9UIF9 1905 aaKnown RBP12.45□□□□□ -0.42
TCOF1-214ENST00000515035 C17orf113A0A1B0GUU1 675 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 SURF4O15260 269 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 ACTL6BO94805 426 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 KLF8O95600 359 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-214ENST00000515035 NME2P22392 152 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 ADPRMQ3LIE5 342 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 SLC22A6Q4U2R8 563 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 SOHLH1Q5JUK2 328 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 EEF1A1P5Q5VTE0 462 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 IDO2Q6ZQW0 420 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 PIANPQ8IYJ0 282 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 CDCA3Q99618 268 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-214ENST00000515035 ARPC5LQ9BPX5 153 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 PELI2Q9HAT8 420 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 TAS2R16Q9NYV7 291 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 POLHQ9Y253 713 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 A0A1W2PPV4 95 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 CDHR4A6H8M9 788 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 EFCAB7A8K855 629 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 J3KTA2 159 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 PPP1R2P9O14990 202 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 GPRIN2O60269 458 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 GPR137BO60478 399 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 UBL3O95164 117 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 ZNF43P17038 809 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 RAB33AQ14088 237 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 DUSP6Q16828 381 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 UEVLDQ8IX04 471 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 C12orf76Q8N812 135 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-214ENST00000515035 OR8J2Q8NGG1 315 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 LINC01599Q8WXQ3 324 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 PEX11GQ96HA9 241 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 ATOH8Q96SQ7 321 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 GSX2Q9BZM3 304 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 PDE7BQ9NP56 450 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 SMCO4Q9NRQ5 59 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 PGAP2Q9UHJ9 254 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 SETD1AO15047 1707 aaKnown RBP12.45□□□□□ -0.42
TCOF1-214ENST00000515035 FAM221BA6H8Z2 402 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 SIX6O95475 246 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 PNMTP11086 282 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 WNT7BP56706 349 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 SPOCK1Q08629 439 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 PAN3Q58A45 887 aaKnown RBP12.45□□□□□ -0.42
TCOF1-214ENST00000515035 ZNF705AQ6ZN79 300 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-214ENST00000515035 OR5D14Q8NGL3 314 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 PATZ1Q9HBE1 687 aaKnown RBP12.45□□□□□ -0.42
TCOF1-214ENST00000515035 SAGE1Q9NXZ1 904 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 KDM3BQ7LBC6 1761 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 ZNF840PA6NDX5 716 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 CTSAP10619 480 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 NDUFA6P56556 154 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 MRPL10Q7Z7H8 261 aaKnown RBP12.45□□□□□ -0.42
TCOF1-214ENST00000515035 ACVR1CQ8NER5 493 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 EGLN3Q9H6Z9 239 aa12.45□□□□□ -0.42
TCOF1-214ENST00000515035 TRAV27A0A087WT01 109 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 HEPACAM2A8MVW5 462 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 BHLHE40O14503 412 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 ADAM10O14672 748 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 B3GALNT1O75752 331 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 KCNK2O95069 426 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 LCATP04180 440 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 EMP2P54851 167 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 SYT6Q5T7P8 510 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 UNQ6126/PRO20091Q6UXV3 157 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms