RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 LRRN3E7EW58 273 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 DNASE2O00115 360 aaPredicted RBP13.61□□□□□ -0.23
DDR1-271ENST00000513240 SSX5O60225 188 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 WDPCPO95876 746 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 HOXB2P14652 356 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 NT5EP21589 574 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 MTNR1AP48039 350 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 LSSP48449 732 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 PXNP49023 591 aaPredicted RBP13.61□□□□□ -0.23
DDR1-271ENST00000513240 RPS7P62081 194 aaKnown RBP13.61□□□□□ -0.23
DDR1-271ENST00000513240 RPS21P63220 83 aaKnown RBP13.61□□□□□ -0.23
DDR1-271ENST00000513240 CORO6Q6QEF8 472 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 WDR88Q6ZMY6 472 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 LAPTM4BQ86VI4 370 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 OR2L8Q8NGY9 312 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 NXPE2Q96DL1 559 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 TMEM43Q9BTV4 400 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 BCL2L14Q9BZR8 327 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 PITHD1Q9GZP4 211 aaPredicted RBP13.61□□□□□ -0.23
DDR1-271ENST00000513240 LRRN3Q9H3W5 708 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 ACSS1Q9NUB1 689 aaPredicted RBP13.61□□□□□ -0.23
DDR1-271ENST00000513240 NUDT15Q9NV35 164 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 COA4Q9NYJ1 87 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 ACTR10Q9NZ32 417 aa13.61□□□□□ -0.23
DDR1-271ENST00000513240 DOCK8Q8NF50 2099 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 A0A1W2PRQ8 180 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 SH3D21A4FU49 640 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 YKT6O15498 198 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 FRKP42685 505 aaPredicted RBP13.6□□□□□ -0.23
DDR1-271ENST00000513240 MEOX2P50222 304 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 CDH11P55287 796 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.6□□□□□ -0.23
DDR1-271ENST00000513240 COX10Q12887 443 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 NDUFAF6Q330K2 333 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 SLC27A4Q6P1M0 643 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 MTFR2Q6P444 385 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 FBXO46Q6PJ61 603 aaPredicted RBP13.6□□□□□ -0.23
DDR1-271ENST00000513240 RPTNQ6XPR3 784 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 COQ8AQ8NI60 647 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 FUZQ9BT04 418 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 PPP1R3EQ9H7J1 279 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 FOLH1BQ9HBA9 442 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 CNOT2Q9NZN8 540 aaKnown RBP13.6□□□□□ -0.23
DDR1-271ENST00000513240 PCOLCE2Q9UKZ9 415 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 EDARQ9UNE0 448 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 FREM2Q5SZK8 3169 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 TRAV27A0A087WT01 109 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 GXYLT2A0PJZ3 443 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 A8MVJ9 347 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 CASKO14936 926 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 APOC1P02654 83 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 LPLP06858 475 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 PEPDP12955 493 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 C5AR1P21730 350 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 TBXA2RP21731 343 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 CMPK1P30085 196 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 SNRPGP62308 76 aaKnown RBP13.6□□□□□ -0.23
DDR1-271ENST00000513240 C1DQ13901 141 aaKnown RBP13.6□□□□□ -0.23
DDR1-271ENST00000513240 ZIC1Q15915 447 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 OTPQ5XKR4 325 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 DGAT2L6Q6ZPD8 337 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 GDF7Q7Z4P5 450 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 FTMTQ8N4E7 242 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 OR4N2Q8NGD1 307 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 RAB7BQ96AH8 199 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 INTS12Q96CB8 462 aaKnown RBP13.6□□□□□ -0.23
DDR1-271ENST00000513240 PTCHD1Q96NR3 888 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 PCBD2Q9H0N5 130 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 BEX1Q9HBH7 125 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 ERVK-19Q9WJR5 959 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 WDR45Q9Y484 360 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 KIAA1549LQ6ZVL6 1849 aa13.6□□□□□ -0.23
DDR1-271ENST00000513240 C2orf16Q68DN1 1984 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 RAB19A4D1S5 217 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 SGK494L7N484 410 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 HRKO00198 91 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 IMPA2O14732 288 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 EMC8O43402 210 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 KDM4BO94953 1096 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 RAB36O95755 333 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 NR2F6P10588 404 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 KIAA1024LP59773 190 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 SHC2P98077 582 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 GPR176Q14439 515 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 SF3A2Q15428 464 aaKnown RBP13.59□□□□□ -0.23
DDR1-271ENST00000513240 ZNF628Q5EBL2 1059 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 ZNF776Q68DI1 518 aaPredicted RBP13.59□□□□□ -0.23
DDR1-271ENST00000513240 OVCH2Q7RTZ1 564 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 ARL14Q8N4G2 192 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 BMPERQ8N8U9 685 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 IL17RCQ8NAC3 791 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 OR2T4Q8NH00 348 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 SPRYD4Q8WW59 207 aaPredicted RBP13.59□□□□□ -0.23
DDR1-271ENST00000513240 CREB3L1Q96BA8 519 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 PRRC1Q96M27 445 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 ZNF681Q96N22 645 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 EMC7Q9NPA0 242 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.59□□□□□ -0.23
DDR1-271ENST00000513240 CABIN1Q9Y6J0 2220 aa13.59□□□□□ -0.23
DDR1-271ENST00000513240 H0YC42 278 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms