RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ZNF786Q8N393 782 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 RIBC1Q8N443 379 aaPredicted RBP10.09□□□□□ -0.79
RNF4-216ENST00000511859 WDR31Q8NA23 367 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 APIPQ96GX9 242 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 IQCGQ9H095 443 aaKnown RBP10.09□□□□□ -0.79
RNF4-216ENST00000511859 EQTNQ9NQ60 294 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 ZNF446Q9NWS9 450 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 MALT1Q9UDY8 824 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 ICAM5Q9UMF0 924 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 MOKQ9UQ07 419 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 GRIP1Q9Y3R0 1128 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 SPEF1Q9Y4P9 236 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 PCDHGB1Q9Y5G3 927 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 GPR171O14626 319 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 SPAG7O75391 227 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 SASH3O75995 380 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 OR4F21O95013 312 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 WNT11O96014 354 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 CHN1P15882 459 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 DDX5P17844 614 aaKnown RBP10.08□□□□□ -0.8
RNF4-216ENST00000511859 KRT4P19013 534 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 PAX7P23759 505 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 CDH13P55290 713 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 CSNK2A1P68400 391 aaPredicted RBP10.08□□□□□ -0.8
RNF4-216ENST00000511859 TGFBR3Q03167 851 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 ZNF117Q03924 483 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 ZNF763Q0D2J5 394 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 FOXL1Q12952 345 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 RIN1Q13671 783 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 RASA2Q15283 850 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 EFNB3Q15768 340 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 PRSS53Q2L4Q9 553 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 SLC25A53Q5H9E4 307 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 SHQ1Q6PI26 577 aaKnown RBP10.08□□□□□ -0.8
RNF4-216ENST00000511859 TIFABQ6ZNK6 161 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 MTDHQ86UE4 582 aaKnown RBP10.08□□□□□ -0.8
RNF4-216ENST00000511859 C1orf162Q8NEQ5 155 aaPredicted RBP10.08□□□□□ -0.8
RNF4-216ENST00000511859 PHOSPHO1Q8TCT1 267 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 GPR119Q8TDV5 335 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 ZNF483Q8TF39 744 aaPredicted RBP10.08□□□□□ -0.8
RNF4-216ENST00000511859 TMEM186Q96B77 213 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 C1QTNF3Q9BXJ4 246 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 ACPTQ9BZG2 426 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 PLK3Q9H4B4 646 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 SLC17A5Q9NRA2 495 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 CA10Q9NS85 328 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 HIF1ANQ9NWT6 349 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 DCTN4Q9UJW0 460 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 ZNF225Q9UK10 706 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 USP22Q9UPT9 525 aa10.08□□□□□ -0.8
RNF4-216ENST00000511859 NUP214P35658 2090 aaPredicted RBP10.07□□□□□ -0.8
RNF4-216ENST00000511859 WNK1Q9H4A3 2382 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 H3BNH8 94 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 MRPL33O75394 65 aaKnown RBP10.07□□□□□ -0.8
RNF4-216ENST00000511859 RGS9O75916 674 aaPredicted RBP10.07□□□□□ -0.8
RNF4-216ENST00000511859 ITGA5P08648 1049 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 RPS17P08708 135 aaKnown RBP10.07□□□□□ -0.8
RNF4-216ENST00000511859 MYZAPP0CAP1 466 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 PRPS1P60891 318 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 TOMM34Q15785 309 aaPredicted RBP10.07□□□□□ -0.8
RNF4-216ENST00000511859 FAM71E1Q6IPT2 247 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 C3orf33Q6P1S2 294 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 ZCCHC12Q6PEW1 402 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 CBLN3Q6UW01 205 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 TMPPEQ6ZT21 453 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 IKBIPQ70UQ0 350 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 RPS27LQ71UM5 84 aaKnown RBP10.07□□□□□ -0.8
RNF4-216ENST00000511859 SPATA19Q7Z5L4 167 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 ZAR1Q86SH2 424 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 SVOPLQ8N434 492 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 ZNF527Q8NB42 609 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 SLC16A11Q8NCK7 471 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 METTL6Q8TCB7 284 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 WDR60Q8WVS4 1066 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 MRPL24Q96A35 216 aaKnown RBP10.07□□□□□ -0.8
RNF4-216ENST00000511859 OR5B2Q96R09 309 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 KCNS3Q9BQ31 491 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 EBPLQ9BY08 206 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 HOXD1Q9GZZ0 328 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 TMBIM4Q9HC24 238 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 TMEM216Q9P0N5 145 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 ARMCX1Q9P291 453 aa10.07□□□□□ -0.8
RNF4-216ENST00000511859 VSTM5A8MXK1 200 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 PDLIM1O00151 329 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 SULT2B1O00204 365 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 ETV2O00321 342 aaPredicted RBP10.06□□□□□ -0.8
RNF4-216ENST00000511859 COPEO14579 308 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 OR4A8P0C604 315 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 IFNGR1P15260 489 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 TSPAN8P19075 237 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 EPHA1P21709 976 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 HMOX2P30519 316 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 DIO1P49895 249 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 PRKAG1P54619 331 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 FOXG1P55316 489 aaPredicted RBP10.06□□□□□ -0.8
RNF4-216ENST00000511859 BTKQ06187 659 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 KLHL26Q53HC5 615 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 ABLIM2Q6H8Q1 611 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 NUP43Q8NFH3 380 aa10.06□□□□□ -0.8
RNF4-216ENST00000511859 ACMSDQ8TDX5 336 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms