RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 VWFP04275 2813 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 TMEM89A2RUT3 159 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 SULT2B1O00204 365 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 DNAJA2O60884 412 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 RSL1D1O76021 490 aaKnown RBP16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 TAC1P20366 129 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 ATP5F1P24539 256 aaPredicted RBP16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 CCR4P51679 360 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 ATP12AP54707 1039 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 SESN3P58005 492 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 SNRPD2P62316 118 aaKnown RBP16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 ACTG1P63261 375 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 PDE7AQ13946 482 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 ZCCHC12Q6PEW1 402 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 ZCCHC24Q8N2G6 241 aaKnown RBP16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 ZNF614Q8N883 585 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 ARL5BQ96KC2 179 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 STACQ99469 402 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 MYOZ1Q9NP98 299 aaPredicted RBP16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 BAIAP2L1Q9UHR4 511 aa16.55■□□□□ 0.24
HMGCS1-206ENST00000511774 IGHV1-18A0A0C4DH31 117 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 TBX19O60806 448 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 HSPA4LO95757 839 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 IGFBP1P08833 259 aaPredicted RBP16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 SDC1P18827 310 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 PHBP35232 272 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 SERPINF1P36955 418 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 SERPINB9P50453 376 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 SLC16A1P53985 500 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 SLC7A5Q01650 507 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 SKP2Q13309 424 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 ADIPOQQ15848 244 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 PDLIM3Q53GG5 364 aaPredicted RBP16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 SYT14P1Q58G82 188 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 DCST2Q5T1A1 773 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 DEF8Q6ZN54 512 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 OLIG3Q7RTU3 272 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 SPATA19Q7Z5L4 167 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 ZFP28Q8NHY6 868 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 PPCDCQ96CD2 204 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 CHMP6Q96FZ7 201 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 TSSK3Q96PN8 268 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 THUMPD3Q9BV44 507 aaKnown RBP16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 RAB17Q9H0T7 212 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 REEP4Q9H6H4 257 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 ACSS1Q9NUB1 689 aaPredicted RBP16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 ZCCHC3Q9NUD5 404 aaKnown RBP16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 SH3BP4Q9P0V3 963 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 AMDHD2Q9Y303 409 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 DTNAQ9Y4J8 743 aa16.54■□□□□ 0.24
HMGCS1-206ENST00000511774 A0A0A6YYJ9 748 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 POC1B-GALNT4F8VUJ3 575 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 SLCO1B7G3V0H7 640 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 KLF11O14901 512 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 ZNF264O43296 627 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 EIF4E2O60573 245 aaKnown RBP16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 BCAS1O75363 584 aaPredicted RBP16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 MRPL33O75394 65 aaKnown RBP16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 SEC22BO75396 215 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 PGCP20142 388 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 ATP6V1C1P21283 382 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 CHN2P52757 468 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 LGALS3BPQ08380 585 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 MERTKQ12866 999 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 CCNIQ14094 377 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 HIKESHIQ53FT3 197 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 PDZK1Q5T2W1 519 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 TSPO2Q5TGU0 170 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 ZNF540Q8NDQ6 660 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 TOR1AIP2Q8NFQ8 470 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 FCRL1Q96LA6 429 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 CDC42EP4Q9H3Q1 356 aaKnown RBP16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 PLK3Q9H4B4 646 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 CA10Q9NS85 328 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 DCTN4Q9UJW0 460 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 NOTCH1P46531 2555 aa16.53■□□□□ 0.24
HMGCS1-206ENST00000511774 CCDC151A5D8V7 595 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 H3BNH8 94 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 OR4A8P0C604 315 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 UBL4AP11441 157 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 DAOP14920 347 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 CSNK2A1P68400 391 aaPredicted RBP16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 CBFBQ13951 182 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 CASP12Q6UXS9 341 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 C17orf78Q8N4C9 275 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 C1orf162Q8NEQ5 155 aaPredicted RBP16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 OR2T11Q8NH01 316 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 HPS1Q92902 700 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 OR11A1Q9GZK7 315 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 HOXD1Q9GZZ0 328 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 SEC61A2Q9H9S3 476 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 GPATCH2Q9NW75 528 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 ZNF180Q9UJW8 692 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 STK38LQ9Y2H1 464 aa16.52■□□□□ 0.24
HMGCS1-206ENST00000511774 FAM157AC9JC47 383 aa16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 LYNX1G3V0Z9 82 aa16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 LYNX1P0DP58 116 aa16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 ASMTP46597 345 aa16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 IDH3GP51553 393 aaPredicted RBP16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 DVL1P1P54792 670 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms