RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CEP55Q53EZ4 464 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 OR2B11Q5JQS5 317 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 C9orf129Q5T035 196 aaKnown RBP2.27□□□□□ -2.05
CHD1-207ENST00000511628 GPRC6AQ5T6X5 926 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 LIPNQ5VXI9 398 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 OR5M10Q6IEU7 315 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 CCDC80Q76M96 950 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 TRPM8Q7Z2W7 1104 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 SKA3Q8IX90 412 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 UBQLNLQ8IYU4 475 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 DHRSXQ8N5I4 330 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 ATP6V0D2Q8N8Y2 350 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 EIF1ADQ8N9N8 165 aaKnown RBP2.27□□□□□ -2.05
CHD1-207ENST00000511628 OR5D13Q8NGL4 314 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 OR56B4Q8NH76 319 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 SLC41A3Q96GZ6 507 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 COQ2Q96H96 371 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 MTMR9Q96QG7 549 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 KLHDC3Q9BQ90 382 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 NIPSNAP3BQ9BS92 247 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 TMEM43Q9BTV4 400 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 Q9H3A6 140 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 VNN3Q9NY84 501 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 ANAPC11Q9NYG5 84 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 AIPL1Q9NZN9 384 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 ONECUT1Q9UBC0 465 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 EXTL2Q9UBQ6 330 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 APOBEC3BQ9UH17 382 aaKnown RBP2.27□□□□□ -2.05
CHD1-207ENST00000511628 CLEC4EQ9ULY5 219 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 UBQLN1Q9UMX0 589 aaKnown RBP2.27□□□□□ -2.05
CHD1-207ENST00000511628 RPH3ALQ9UNE2 315 aa2.27□□□□□ -2.05
CHD1-207ENST00000511628 TRAV26-1A0A087WT03 109 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 A0A1B0GUS0 222 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 B4DXG7 233 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 K7N7A8 449 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 WWP2O00308 870 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 TNFSF11O14788 317 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 ZNF208O43345 1280 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 TPST2O60704 377 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 RHOBTB1O94844 696 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 IGHG4P01861 327 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 ZNF853P0CG23 659 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 GCFC2P16383 781 aaKnown RBP2.26□□□□□ -2.05
CHD1-207ENST00000511628 AQP1P29972 269 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 EPHX2P34913 555 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 GRIA1P42261 906 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 KIR2DS2P43631 304 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 RGRP47804 291 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 EFNA3P52797 238 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 RPS8P62241 208 aaKnown RBP2.26□□□□□ -2.05
CHD1-207ENST00000511628 TNFRSF17Q02223 184 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 CAPRIN1Q14444 709 aaKnown RBP2.26□□□□□ -2.05
CHD1-207ENST00000511628 TRIM16LQ309B1 348 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 ATL3Q6DD88 541 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 ZNF544Q6NX49 715 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 UQCC3Q6UW78 93 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 Q6ZVH6 145 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 FRA10AC1Q70Z53 315 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 APOBEC3FQ8IUX4 373 aaKnown RBP2.26□□□□□ -2.05
CHD1-207ENST00000511628 OR10H4Q8NGA5 316 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 ZNF564Q8TBZ8 553 aaPredicted RBP2.26□□□□□ -2.05
CHD1-207ENST00000511628 FAM110BQ8TC76 370 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 IL4I1Q96RQ9 567 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 CCNL2Q96S94 520 aaPredicted RBP2.26□□□□□ -2.05
CHD1-207ENST00000511628 PLEKHF1Q96S99 279 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 ZNF184Q99676 751 aaPredicted RBP2.26□□□□□ -2.05
CHD1-207ENST00000511628 SLC35A5Q9BS91 424 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 CAPS2Q9BXY5 557 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 POPDC2Q9HBU9 364 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 TMEM9Q9P0T7 183 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 KLHL21Q9UJP4 597 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 SLCO1B1Q9Y6L6 691 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 NOTCH2Q04721 2471 aa2.26□□□□□ -2.05
CHD1-207ENST00000511628 IGHV1OR15-1A0A075B7D0 117 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 A0A0G2JRQ6 117 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 SMIM28A0A1B0GU29 152 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 FOXE1O00358 373 aaPredicted RBP2.25□□□□□ -2.05
CHD1-207ENST00000511628 MPHOSPH10O00566 681 aaKnown RBP2.25□□□□□ -2.05
CHD1-207ENST00000511628 NBR2O15453 112 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 CXCL13O43927 109 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 SLITRK3O94933 977 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 LYPD3O95274 346 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 HSPB1P04792 205 aaKnown RBP2.25□□□□□ -2.05
CHD1-207ENST00000511628 RBMY1CP0DJD4 496 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 MGMTP16455 207 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 NPR2P20594 1047 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 IMPDH1P20839 514 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 FGF9P31371 208 aaPredicted RBP2.25□□□□□ -2.05
CHD1-207ENST00000511628 UGT1A3P35503 534 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 PTGDSP41222 190 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 DAP3P51398 398 aaKnown RBP2.25□□□□□ -2.05
CHD1-207ENST00000511628 BIDP55957 195 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 VGLL4Q14135 290 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 GRB7Q14451 532 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 GANABQ14697 944 aaKnown RBP2.25□□□□□ -2.05
CHD1-207ENST00000511628 KIAA0040Q15053 153 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 PDK3Q15120 406 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 EXOC3L2Q2M3D2 409 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 SFT2D3Q587I9 215 aa2.25□□□□□ -2.05
CHD1-207ENST00000511628 PAGE2BQ5JRK9 111 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms