RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 OVCH2Q7RTZ1 564 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 C17orf64Q86WR6 236 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ADGRF4Q8IZF3 695 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 FRMD1Q8N878 549 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 FAM71CQ8NEG0 241 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 OR9K2Q8NGE7 335 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ZNF563Q8TA94 476 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ADAMTS17Q8TE56 1095 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ADAMTS18Q8TE60 1221 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 SDR42E1Q8WUS8 393 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 COA7Q96BR5 231 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 EID2BQ96D98 161 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 PDXPQ96GD0 296 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ZNF681Q96N22 645 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 MUS81Q96NY9 551 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 IL12RB2Q99665 862 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 TIMP4Q99727 224 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 CMKLR1Q99788 373 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 PIGQQ9BRB3 760 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ZNF426Q9BUY5 554 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 TRMT61BQ9BVS5 477 aaKnown RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 GATA5Q9BWX5 397 aaPredicted RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 SORBS1Q9BX66 1292 aaKnown RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 OR51I1Q9H343 314 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 BRF2Q9HAW0 419 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ADAP2Q9NPF8 381 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 TREM2Q9NZC2 230 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 SLC17A7Q9P2U7 560 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 PEF1Q9UBV8 284 aaKnown RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 UQCR10Q9UDW1 63 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 EPHA6Q9UF33 1036 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 GPR160Q9UJ42 338 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 RAB22AQ9UL26 194 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 TP53TG5Q9Y2B4 290 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 MOB4Q9Y3A3 225 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 A0A1W2PN81 502 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 A0A1W2PQ09 198 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 OR5H14A6NHG9 310 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 A8MU76 341 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 SGK494L7N484 410 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 SLC16A5O15375 505 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 FABP7O15540 132 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 HOXC11O43248 304 aaPredicted RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 ENDOD1O94919 500 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 TTRP02766 147 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ITGB2P05107 769 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 POU2F2P09086 479 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 COX6CP09669 75 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 SUPT20HL2P0C7V6 817 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 SCGB1C2P0DMR2 95 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 CT45A6P0DMU7 189 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 CT45A5P0DMU8 189 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 CT45A7P0DMV0 189 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 C6P13671 934 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 OSMP13725 252 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 AK4P27144 223 aaPredicted RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 GABRB3P28472 473 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 VIPR1P32241 457 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 SFTPDP35247 375 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 CHRNA7P36544 502 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 GRM5P41594 1212 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 PTGIRP43119 386 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 SLC6A8P48029 635 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ARSDP51689 593 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 YBEYP58557 167 aaPredicted RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 SELENOVP59797 346 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 RAP1BP61224 184 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 PPP1CBP62140 327 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 BCL2L1Q07817 233 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ZNF763Q0D2J5 394 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 APOFQ13790 326 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 UBE2SQ16763 222 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 CTU2Q2VPK5 515 aaKnown RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 TMEM119Q4V9L6 283 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 CT45A1Q5HYN5 189 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 FAM26DQ5JW98 314 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 EOGTQ5NDL2 527 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 LIPNQ5VXI9 398 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 RAVER1Q8IY67 606 aaKnown RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 MAML2Q8IZL2 1156 aaPredicted RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 SPICQ8N5J4 248 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 JAGN1Q8N5M9 183 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 NAXEQ8NCW5 288 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 FBXO22Q8NEZ5 403 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 OR6C4Q8NGE1 309 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 OR6K2Q8NGY2 324 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 CT45A3Q8NHU0 189 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ASB17Q8WXJ9 295 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 TMEM190Q8WZ59 177 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 KIAA1191Q96A73 305 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 MIB2Q96AX9 1013 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 WDR34Q96EX3 536 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 SGK494Q96LW2 274 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 MS4A10Q96PG2 267 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 PKMYT1Q99640 499 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ELOVL4Q9GZR5 314 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 OSBPL2Q9H1P3 480 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 GALNT9Q9HCQ5 603 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 RANGRFQ9HD47 186 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms