RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 CRYGSP22914 178 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 DSTNP60981 165 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 IRX1P78414 480 aaPredicted RBP16.64■□□□□ 0.25
UBE3D-207ENST00000509102 HMGN2P46Q86SG4 172 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 ZNF440Q8IYI8 595 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 OR9I1Q8NGQ6 314 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 VPS33AQ96AX1 596 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 ZG16BQ96DA0 208 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 ZC3HAV1LQ96H79 300 aaKnown RBP16.64■□□□□ 0.25
UBE3D-207ENST00000509102 CCDC28BQ9BUN5 200 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 LIME1Q9H400 295 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 ARMC7Q9H6L4 198 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 SLCO1B3Q9NPD5 702 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 C6orf203Q9P0P8 240 aaPredicted RBP16.64■□□□□ 0.25
UBE3D-207ENST00000509102 CHRNA9Q9UGM1 479 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 CELSR1Q9NYQ6 3014 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 PRAMEF27A3QJZ7 478 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 SULT2B1O00204 365 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 NID1P14543 1247 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 CCKARP32238 428 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 IDH2P48735 452 aaKnown RBP16.63■□□□□ 0.25
UBE3D-207ENST00000509102 CLK1P49759 484 aaKnown RBP16.63■□□□□ 0.25
UBE3D-207ENST00000509102 DIO1P49895 249 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 AQP5P55064 265 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 PPP2R2AP63151 447 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 ZSWIM7Q19AV6 140 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 LIN52Q52LA3 116 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 ZNF550Q7Z398 422 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 TUSC5Q8IXB3 177 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 PIK3IP1Q96FE7 263 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 ALPK1Q96QP1 1244 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 HDHD5Q9BXW7 423 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 OR10A4Q9H209 315 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 EMC3Q9P0I2 261 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 ZNF232Q9UNY5 417 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 GPR52Q9Y2T5 361 aa16.63■□□□□ 0.25
UBE3D-207ENST00000509102 AKAP6Q13023 2319 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 F8P00451 2351 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 IGHV3-15A0A0B4J1V0 119 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 CFAP73A6NFT4 308 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 CLDN24A6NM45 220 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 BCHEP06276 602 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 ETFAP13804 333 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 MRPL19P49406 292 aaKnown RBP16.62■□□□□ 0.25
UBE3D-207ENST00000509102 IDH3AP50213 366 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 RASGEF1BQ0VAM2 473 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 LARS2Q15031 903 aaKnown RBP16.62■□□□□ 0.25
UBE3D-207ENST00000509102 ANKRD34AQ69YU3 496 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 TMPPEQ6ZT21 453 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 STEAP2Q8NFT2 490 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 CNOT9Q92600 299 aaKnown RBP16.62■□□□□ 0.25
UBE3D-207ENST00000509102 DDIT4LQ96D03 193 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 MBD6Q96DN6 1003 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 CCDC106Q9BWC9 280 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 PLEKHF2Q9H8W4 249 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 CTPS2Q9NRF8 586 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 PRDM4Q9UKN5 801 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 HDGFL3Q9Y3E1 203 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 ABCA4P78363 2273 aa16.62■□□□□ 0.25
UBE3D-207ENST00000509102 HRNRQ86YZ3 2850 aaPredicted RBP16.61■□□□□ 0.25
UBE3D-207ENST00000509102 CYTIPO60759 359 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 C1QCP02747 245 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 PSMB1P20618 241 aaKnown RBP16.61■□□□□ 0.25
UBE3D-207ENST00000509102 RPS4Y1P22090 263 aaKnown RBP16.61■□□□□ 0.25
UBE3D-207ENST00000509102 POLR2HP52434 150 aaKnown RBP16.61■□□□□ 0.25
UBE3D-207ENST00000509102 MAP2K6P52564 334 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 COPZ1P61923 177 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 FADDQ13158 208 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 MRPL2Q5T653 305 aaKnown RBP16.61■□□□□ 0.25
UBE3D-207ENST00000509102 TFAP2EQ6VUC0 442 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 STAC2Q6ZMT1 411 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 OR52P1PQ8NH57 321 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 GTF2H4Q92759 462 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 ZNF524Q96C55 264 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 USB1Q9BQ65 265 aaKnown RBP16.61■□□□□ 0.25
UBE3D-207ENST00000509102 ACTR6Q9GZN1 396 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 CXXC4Q9H2H0 198 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 RABEP2Q9H5N1 569 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 BCO1Q9HAY6 547 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 SLC6A13Q9NSD5 602 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 TMEM45AQ9NWC5 275 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 HEATR5AQ86XA9 2040 aa16.61■□□□□ 0.25
UBE3D-207ENST00000509102 A0A0G2JPF8 293 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 HNRNPCL2B2RXH8 293 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 HNRNPCL3B7ZW38 293 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 C5orf58C9J3I9 102 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 CLIC1O00299 241 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 NR5A2O00482 541 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 FAAHO00519 579 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 SMAD9O15198 467 aaKnown RBP16.6■□□□□ 0.25
UBE3D-207ENST00000509102 DNPH1O43598 174 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 HNRNPCL1O60812 293 aaKnown RBP16.6■□□□□ 0.25
UBE3D-207ENST00000509102 BCAS1O75363 584 aaPredicted RBP16.6■□□□□ 0.25
UBE3D-207ENST00000509102 PMS2P2O95744 297 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 FESP07332 822 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 HNRNPCL4P0DMR1 293 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 PPIBP23284 216 aaKnown RBP16.6■□□□□ 0.25
UBE3D-207ENST00000509102 IL32P24001 234 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 SLC1A3P43003 542 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 NR1H2P55055 460 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms