RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 SERINC1Q9NRX5 453 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 ACER3Q9NUN7 267 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 KLHL13Q9P2N7 655 aa13.19□□□□□ -0.3
UBE2D3-228ENST00000508974 ETV2O00321 342 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 SMAD9O15198 467 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 ADAM11O75078 769 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 FESP07332 822 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 IDH2P48735 452 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 DIO1P49895 249 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 POLR2JP52435 117 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 LRRC74AQ0VAA2 488 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 DEFB113Q30KQ7 82 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 SYT14P1Q58G82 188 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 EPGNQ6UW88 154 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 WFDC8Q8IUA0 241 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 MIER2Q8N344 545 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 WDR60Q8WVS4 1066 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 DYDC1Q8WWB3 177 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 RNF166Q96A37 237 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 TRNT1Q96Q11 434 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 ZNF300Q96RE9 604 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 OR11A1Q9GZK7 315 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 ACTR6Q9GZN1 396 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 SDR39U1Q9NRG7 319 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 ZIM2Q9NZV7 527 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 LIPT1Q9Y234 373 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 VPS13CQ709C8 3753 aa13.18□□□□□ -0.3
UBE2D3-228ENST00000508974 AGAP5A6NIR3 686 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 SULT2B1O00204 365 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 POLR3GO15318 223 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 DNAJA2O60884 412 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 KRT75O95678 551 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 BCHEP06276 602 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 YES1P07947 543 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 GUSBP08236 651 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 IL7RP16871 459 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 CD53P19397 219 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 PCYT1AP49585 367 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 RAC3P60763 192 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 PPP2R2AP63151 447 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 RASGEF1BQ0VAM2 473 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 RPS26P11Q5JNZ5 115 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 SLC2A7Q6PXP3 512 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 TFAP2EQ6VUC0 442 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 LRRC74BQ6ZQY2 392 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 ITCHQ96J02 903 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 ALPK1Q96QP1 1244 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 PSD2Q9BQI7 771 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 EBF4Q9BQW3 602 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 CCDC106Q9BWC9 280 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 RMND5AQ9H871 391 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 FANCFQ9NPI8 374 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 KLHL9Q9P2J3 617 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 P2RX2Q9UBL9 471 aa13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 ZNF469Q96JG9 3925 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-228ENST00000508974 RAI1Q7Z5J4 1906 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 ADAP00813 363 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 CD99P14209 185 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 EDNRAP25101 427 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 APOBEC1P41238 236 aaKnown RBP13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 IDH3AP50213 366 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 MVDP53602 400 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 DSTNP60981 165 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 STX1BP61266 288 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 MAPK11Q15759 364 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 MRPL2Q5T653 305 aaKnown RBP13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 VRK2Q86Y07 508 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 TGIF2LYQ8IUE0 185 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 SLC43A2Q8N370 569 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 GOLGA6L1Q8N7Z2 621 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 S100PBPQ96BU1 408 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 MBD6Q96DN6 1003 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 THOC1Q96FV9 657 aaKnown RBP13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 ARL5BQ96KC2 179 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 C7orf26Q96N11 449 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 TPT1P8Q9HAU6 139 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 TCF7L2Q9NQB0 619 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 EXOSC3Q9NQT5 275 aaKnown RBP13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 RLIMQ9NVW2 624 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 CHRNA9Q9UGM1 479 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 PRSS50Q9UI38 385 aa13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 ING1Q9UK53 422 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-228ENST00000508974 TMED7-TICAM2A0A0A6YYA0 188 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 FAM234BA2RU67 622 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 CYTIPO60759 359 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 GCM2O75603 506 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 DBIP07108 87 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 GKN3PP0CG01 181 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 IL32P24001 234 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 AQP5P55064 265 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 CSNK2A1P68400 391 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 ADAM8P78325 824 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 FOXD4Q12950 439 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 GNA13Q14344 377 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 ZNF836Q6ZNA1 936 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 TMPPEQ6ZT21 453 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 GRINAQ7Z429 371 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 ADGRG3Q86Y34 549 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms