RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 KLRC3Q07444 240 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 TGM3Q08188 693 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 RAB40BQ12829 278 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 CUL1Q13616 776 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 SLC10A1Q14973 349 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 SLC5A12Q1EHB4 618 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 KLHL38Q2WGJ6 581 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 BCL7AQ4VC05 210 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 SFT2D3Q587I9 215 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 SPANXN2Q5MJ10 180 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 C15orf54Q8N8G6 183 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 FAM83FQ8NEG4 500 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 RAB3IL1Q8TBN0 382 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 TCTEX1D2Q8WW35 142 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 CRYGNQ8WXF5 182 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 STARD8Q92502 1023 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 SERAC1Q96JX3 654 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 C9orf85Q96MD7 179 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 CHP1Q99653 195 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 IQCGQ9H095 443 aaKnown RBP3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 EXO5Q9H790 373 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 PRODH2Q9UF12 536 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 PSME2Q9UL46 239 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 KIAA1257Q9ULG3 409 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 ABCG2Q9UNQ0 655 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 RNF24Q9Y225 148 aa3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 MRPL11Q9Y3B7 192 aaKnown RBP3.2□□□□□ -1.9
TRAPPC13-209ENST00000508304 TTC41PQ6P2S7 1318 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 PPIAL4EA0A075B759 164 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 ARPC4-TTLL3A0A0A6YYG9 625 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 SERTM2A0A1B0GWG4 89 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF840PA6NDX5 716 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 SAGE2PA6NJ88 616 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 TMEM110-MUSTN1A8MSY1 372 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 C9JVG2 144 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 H0YIV9 168 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 HAS3O00219 553 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 HIP1O00291 1037 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 NBR2O15453 112 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 PHF1O43189 567 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 EFNA2O43921 213 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 DFNA5O60443 496 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 IGHG1P01857 330 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 PPIAL4FP0DN26 164 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 POLR2EP19388 210 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 CD1CP29017 333 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 EPHX2P34913 555 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 NF2P35240 595 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 HMGCLP35914 325 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 ARHGDIBP52566 201 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 RGS8P57771 180 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 ENPEPQ07075 957 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 ST3GAL3Q11203 375 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 SIX1Q15475 284 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 SLC25A52Q3SY17 297 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 C6orf226Q5I0X4 101 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 C1orf185Q5T7R7 199 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 RSBN1Q5VWQ0 802 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 RAET1LQ5VY80 246 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 TMEM107Q6UX40 140 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 EIF3MQ7L2H7 374 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 LUZP2Q86TE4 346 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 LRRC49Q8IUZ0 686 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 LINC01561Q8N1V8 128 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 ALLCQ8N6M5 410 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 KIR3DL3Q8N743 410 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 CSNK1G2-AS1Q8NCQ2 148 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 OR5L2Q8NGL0 311 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 TYMSOSQ8TAI1 123 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 TFB1MQ8WVM0 346 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 C11orf70Q9BRQ4 267 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 DPH7Q9BTV6 452 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 PARD6BQ9BYG5 372 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 RAB34Q9BZG1 259 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 GLT8D2Q9H1C3 349 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 CLSTN2Q9H4D0 955 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 NHEJ1Q9H9Q4 299 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZFP14Q9HCL3 533 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 RPRD1BQ9NQG5 326 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 PSMC3IPQ9P2W1 217 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 MLXQ9UH92 298 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 TMCO1Q9UM00 188 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 VSIG4Q9Y279 399 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 CA5BQ9Y2D0 317 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 POLDIP2Q9Y2S7 368 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 PPIAL4AQ9Y536 164 aa3.19□□□□□ -1.9
TRAPPC13-209ENST00000508304 FER1L5A0AVI2 2057 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 A0A087WWV3 80 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 IGHV2-70DA0A0C4DH43 119 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 IQANK1A0A1B0GTG1 560 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 EFCAB7A8K855 629 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 FOXI3A8MTJ6 420 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 A8MXQ7 604 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 TCP11X1B4DZS4 312 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 E9PLD3 99 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 G3V3Y1 287 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 K7EQG2 157 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 KIF2AO00139 706 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 TAPBPO15533 448 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 CDH16O75309 829 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms