RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 NRROSQ86YC3 692 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMEM25Q86YD3 366 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 WFDC8Q8IUA0 241 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 DMRTC2Q8IXT2 367 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CCDC36Q8IYA8 594 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR4N4Q8N0Y3 316 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 EIF4E3Q8N5X7 224 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ESX1Q8N693 406 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMEM99Q8N816 258 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ANKRD53Q8N9V6 530 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR2L5Q8NG80 312 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR11H4Q8NGC9 324 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR5T2Q8NGG2 359 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR5AR1Q8NGP9 310 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR2L8Q8NGY9 312 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR2T27Q8NH04 317 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CEP76Q8TAP6 659 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SCARB1Q8WTV0 552 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 THAP4Q8WY91 577 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SMPDL3BQ92485 455 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 NSMAFQ92636 917 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 THRSPQ92748 146 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 RAB7BQ96AH8 199 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SMIM19Q96E16 107 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SGTBQ96EQ0 304 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 S100A16Q96FQ6 103 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 C4orf36Q96KX1 117 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 MRGPRX3Q96LB0 322 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZFP3Q96NJ6 502 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 PRAP1Q96NZ9 151 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 IL17FQ96PD4 163 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 WFDC6Q9BQY6 131 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF559Q9BR84 538 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 UTP23Q9BRU9 249 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC46A2Q9BY10 475 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ABCG4Q9H172 646 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 RSPH9Q9H1X1 276 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 TTYH1Q9H313 450 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 METTL17Q9H7H0 456 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ISG20L2Q9H9L3 353 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 LHX9Q9NQ69 397 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 TDP1Q9NUW8 608 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SDHAF2Q9NX18 166 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 TEX10Q9NXF1 929 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SIDT1Q9NXL6 827 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 TAS2R5Q9NYW4 299 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 NTMQ9P121 344 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 C5AR2Q9P296 337 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 MGAT4CQ9UBM8 478 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC7A7Q9UM01 511 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 MRPS7Q9Y2R9 242 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 MED31Q9Y3C7 131 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ETV7Q9Y603 341 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CASP8AP2Q9UKL3 1982 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 PLSCR5A0PG75 271 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 FEZF1A0PJY2 475 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ANTXRLA6NF34 631 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 MFSD2BA6NFX1 497 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 URADA6NGE7 173 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMEM88BA6NKF7 163 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 C1QTNF3-AMACRE9PGA6 284 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 J3QW42 95 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 AIPO00170 330 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 BHLHE40O14503 412 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TSPAN4O14817 238 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 MID1O15344 667 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ERI3O43414 337 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 AQP8O94778 261 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF432O94892 652 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR2A4O95047 310 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 NDUFB6O95139 128 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 MPC2O95563 127 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 AIFM1O95831 613 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TBX6O95947 436 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 EGFP01133 1207 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 RPLP1P05386 114 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CTSLP07711 333 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ACSM4P0C7M7 580 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CALCBP10092 127 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TFPIP10646 304 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 LAMP2P13473 410 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 C6P13671 934 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 F3P13726 295 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ADRB3P13945 408 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF250P15622 560 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ATP5A1P25705 553 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TEAD1P28347 426 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 NOS3P29474 1203 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CMPK1P30085 196 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 AGTR1P30556 359 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TLX1P31314 330 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 S100A11P31949 105 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 PYCR1P32322 319 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TRHRP34981 398 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CD96P40200 585 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 MC3RP41968 323 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 RBM34P42696 430 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TM4SF4P48230 202 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 SOX9P48436 509 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms