RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 TBK1Q9UHD2 729 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 RPH3ALQ9UNE2 315 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 ABCG2Q9UNQ0 655 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 PLLPQ9Y342 182 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 TIMM10BQ9Y5J6 103 aa2.43□□□□□ -2.02
LSM6-205ENST00000507449 TP53BP1Q12888 1972 aaPredicted RBP2.43□□□□□ -2.02
LSM6-205ENST00000507449 HDAC3O15379 428 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 CXCL13O43927 109 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 HCN1O60741 890 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 IGHDP01880 384 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 CAPN1P07384 714 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 ZNF44P15621 663 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 FGF9P31371 208 aaPredicted RBP2.42□□□□□ -2.02
LSM6-205ENST00000507449 PTGDSP41222 190 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 BIDP55957 195 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 GRB7Q14451 532 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 TRIM16LQ309B1 348 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 TMEM225Q6GV28 225 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 CCDC137Q6PK04 289 aaKnown RBP2.42□□□□□ -2.02
LSM6-205ENST00000507449 CASC1Q6TDU7 716 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 UNQ9370/PRO34162Q6UXP9 181 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 SYT10Q6XYQ8 523 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 IL34Q6ZMJ4 242 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 RGS9BPQ6ZS82 235 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 CCDC80Q76M96 950 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 ZNF589Q86UQ0 364 aaPredicted RBP2.42□□□□□ -2.02
LSM6-205ENST00000507449 LCA5Q86VQ0 697 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 TGIF2LYQ8IUE0 185 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 ATP6V0D2Q8N8Y2 350 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 CHCHD10Q8WYQ3 142 aaPredicted RBP2.42□□□□□ -2.02
LSM6-205ENST00000507449 NEIL2Q969S2 332 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 C16orf74Q96GX8 76 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 COQ2Q96H96 371 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 CCNL2Q96S94 520 aaPredicted RBP2.42□□□□□ -2.02
LSM6-205ENST00000507449 ZNF385DQ9H6B1 395 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 POPDC2Q9HBU9 364 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 APMAPQ9HDC9 416 aa2.42□□□□□ -2.02
LSM6-205ENST00000507449 ATAD2BQ9ULI0 1458 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 IGKV1D-8A0A087WSZ0 117 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 A0A1B0GUS0 222 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 FAM231BA6NCW3 169 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 TRDCB7Z8K6 153 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 ZNF264O43296 627 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 PRKAB2O43741 272 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 OR10H3O60404 316 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 TBL1XO60907 577 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 ECI2O75521 394 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 RHOBTB1O94844 696 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 LALBAP00709 142 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 RNH1P13489 461 aaKnown RBP2.41□□□□□ -2.02
LSM6-205ENST00000507449 NCK1P16333 377 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 NPR2P20594 1047 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 HOXD10P28358 340 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 MAP3K8P41279 467 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 BTDP43251 543 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 DAP3P51398 398 aaKnown RBP2.41□□□□□ -2.02
LSM6-205ENST00000507449 STX17P56962 302 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 ZNF45Q02386 682 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 GANABQ14697 944 aaKnown RBP2.41□□□□□ -2.02
LSM6-205ENST00000507449 ZNF79Q15937 498 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 MAJINQ3KP22 176 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 CFAP221Q4G0U5 840 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 OR2G6Q5TZ20 316 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 ATL3Q6DD88 541 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 ZSCAN25Q6NSZ9 544 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 SCARA5Q6ZMJ2 495 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 DNM1P46Q6ZS02 220 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 NLRP9Q7RTR0 991 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 FAM220AQ7Z4H9 259 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 ZNF679Q8IYX0 411 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 ZCCHC7Q8N3Z6 543 aaKnown RBP2.41□□□□□ -2.02
LSM6-205ENST00000507449 C14orf178Q8N769 122 aaPredicted RBP2.41□□□□□ -2.02
LSM6-205ENST00000507449 BBS1Q8NFJ9 593 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 LINC01006Q8NI28 216 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 C7orf33Q8WU49 177 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 SLC41A3Q96GZ6 507 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 PGLYRP4Q96LB8 373 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 MTMR9Q96QG7 549 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 SECISBP2Q96T21 854 aaKnown RBP2.41□□□□□ -2.02
LSM6-205ENST00000507449 NPAS2Q99743 824 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 CNPY3Q9BT09 278 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 NT5C3AQ9H0P0 336 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 VCX2Q9H322 139 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 OR51J1Q9H342 316 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 SMYD3Q9H7B4 428 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 PTGES2Q9H7Z7 377 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 ISG20L2Q9H9L3 353 aaKnown RBP2.41□□□□□ -2.02
LSM6-205ENST00000507449 NANSQ9NR45 359 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 NUDT15Q9NV35 164 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 PHF11Q9UIL8 331 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 SLCO1B1Q9Y6L6 691 aa2.41□□□□□ -2.02
LSM6-205ENST00000507449 DDX49Q9Y6V7 483 aaKnown RBP2.41□□□□□ -2.02
LSM6-205ENST00000507449 TRAV26-1A0A087WT03 109 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 C15orf38-AP3S2A0A0A6YYH1 394 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 KLLNB2CW77 178 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 E7ESA3 106 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 CXCL11O14625 94 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 HAT1O14929 419 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 HCRTR1O43613 425 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 LGI1O95970 557 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms