RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 TSPYL5Q86VY4 417 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-210ENST00000506767 ATCAYQ86WG3 371 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 CARM1Q86X55 608 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 DHFR2Q86XF0 187 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 DOLPP1Q86YN1 238 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 ULK2Q8IYT8 1036 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 VANGL1Q8TAA9 524 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-210ENST00000506767 C3orf49Q96BT1 292 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 HSH2DQ96JZ2 352 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 MCHR1Q99705 422 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 C12orf10Q9HB07 376 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 PNPLA3Q9NST1 481 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 OSGIN1Q9UJX0 560 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 ACAD8Q9UKU7 415 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 CFAP46Q8IYW2 2715 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 DNAJC13O75165 2243 aa11.58□□□□□ -0.56
TCOF1-210ENST00000506767 GTF3C1Q12789 2109 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 A0A0B4J2E0 115 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 A0A1B0GWA3 101 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 A0A1B0GX12 115 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 TCRBV5S2A0A599 114 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 PRKD3O94806 890 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 SEMG1P04279 462 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 TPOP07202 933 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 STSP08842 583 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 POU3F2P20265 443 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-210ENST00000506767 GNLYP22749 145 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 FKBP2P26885 142 aaKnown RBP11.57□□□□□ -0.56
TCOF1-210ENST00000506767 UQCRFS1P47985 274 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 MAP2K6P52564 334 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 SUCLG1P53597 346 aaKnown RBP11.57□□□□□ -0.56
TCOF1-210ENST00000506767 CLDN20P56880 219 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 CTU2Q2VPK5 515 aaKnown RBP11.57□□□□□ -0.56
TCOF1-210ENST00000506767 IFI44LQ53G44 452 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 ENTPD8Q5MY95 495 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 CYP2R1Q6VVX0 501 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 TSEN54Q7Z6J9 526 aaKnown RBP11.57□□□□□ -0.56
TCOF1-210ENST00000506767 ADGRE4PQ86SQ3 457 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 ATG4DQ86TL0 474 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-210ENST00000506767 CD163Q86VB7 1156 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 PM20D2Q8IYS1 436 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 LILRA2Q8N149 483 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 CADM2Q8N3J6 435 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 FAM86B1Q8N7N1 296 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 GEMIN6Q8WXD5 167 aaKnown RBP11.57□□□□□ -0.56
TCOF1-210ENST00000506767 MCUR1Q96AQ8 359 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 CCDC124Q96CT7 223 aaKnown RBP11.57□□□□□ -0.56
TCOF1-210ENST00000506767 PYURFQ96I23 114 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 ADGRG7Q96K78 797 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 AMBRA1Q9C0C7 1298 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 POLR2J2Q9GZM3 115 aaKnown RBP11.57□□□□□ -0.56
TCOF1-210ENST00000506767 POLR2J3Q9H1A7 115 aaKnown RBP11.57□□□□□ -0.56
TCOF1-210ENST00000506767 TMEM27Q9HBJ8 222 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 SERINC1Q9NRX5 453 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 STOML1Q9UBI4 398 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 CHRNA9Q9UGM1 479 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 SLC7A8Q9UHI5 535 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 POMPQ9Y244 141 aa11.57□□□□□ -0.56
TCOF1-210ENST00000506767 ZGRF1Q86YA3 2104 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 TMED7-TICAM2A0A0A6YYA0 188 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 TMEM72A0PK05 275 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 AHRRA9YTQ3 701 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 PRRG2O14669 202 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 ADAMDEC1O15204 470 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 ZNF208O43345 1280 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 WDR1O75083 606 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 FLNBO75369 2602 aaKnown RBP11.56□□□□□ -0.56
TCOF1-210ENST00000506767 LYPD3O95274 346 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 THY1P04216 161 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 SHC1P29353 583 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 CA7P43166 264 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 C3AR1Q16581 482 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 IQCCQ4KMZ1 466 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 C3orf33Q6P1S2 294 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 ZNF613Q6PF04 617 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 ULK3Q6PHR2 472 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 LINC00114Q6XXX2 140 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 FKBP9P1Q75LS8 142 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 OR5M9Q8NGP3 310 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 ZPLD1Q8TCW7 415 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 ADAMTS16Q8TE57 1224 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 SLC25A43Q8WUT9 341 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-210ENST00000506767 DNAJA4Q8WW22 397 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-210ENST00000506767 SLC38A4Q969I6 547 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 C7orf34Q96L11 122 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 OSGIN2Q9Y236 505 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 TMED7Q9Y3B3 224 aa11.56□□□□□ -0.56
TCOF1-210ENST00000506767 MED12Q93074 2177 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 A0A0J9YW62 118 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 CPSF4LA6NMK7 179 aaKnown RBP11.55□□□□□ -0.56
TCOF1-210ENST00000506767 GJE1A6NN92 205 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 H0YC42 278 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 OPN1LWP04000 364 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 IFNW1P05000 195 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 HOXD4P09016 255 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-210ENST00000506767 GABRA1P14867 456 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 PTGER4P35408 488 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 CLK1P49759 484 aaKnown RBP11.55□□□□□ -0.56
TCOF1-210ENST00000506767 CDH12P55289 794 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 TPD52P55327 224 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms