RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 CCDC6Q16204 474 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 PRAMEF17Q5VTA0 474 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 ZNF529Q6P280 563 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 RBPMS2Q6ZRY4 209 aaKnown RBP5.39□□□□□ -1.55
SCLT1-207ENST00000506233 C11orf44Q8N8P7 122 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 LRRC75AQ8NAA5 344 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 ROBO4Q8WZ75 1007 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 OPALINQ96PE5 141 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 RBM4BQ9BQ04 359 aaKnown RBP5.39□□□□□ -1.55
SCLT1-207ENST00000506233 H2AFJQ9BTM1 129 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 RBM4Q9BWF3 364 aaKnown RBP5.39□□□□□ -1.55
SCLT1-207ENST00000506233 UCK1Q9HA47 277 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 FANCEQ9HB96 536 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 C8orf4Q9NR00 106 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 JKAMPQ9P055 326 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 SCML1Q9UN30 329 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 RPH3AQ9Y2J0 694 aaPredicted RBP5.39□□□□□ -1.55
SCLT1-207ENST00000506233 RHBDD3Q9Y3P4 386 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 ENPP4Q9Y6X5 453 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 H0YGG7 62 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 MAGEB3O15480 346 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 KCNJ13O60928 360 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 SC5DO75845 299 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 CPSF4O95639 269 aaKnown RBP5.39□□□□□ -1.55
SCLT1-207ENST00000506233 CCDC159P0C7I6 412 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 CYP4B1P13584 511 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 RPS2P15880 293 aaKnown RBP5.39□□□□□ -1.55
SCLT1-207ENST00000506233 CASRP41180 1078 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 CCR3P51677 355 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 DGKEP52429 567 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 YPEL5P62699 121 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 EGR4Q05215 589 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 ACSM2AQ08AH3 577 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 RBBP4Q09028 425 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 EOGTQ5NDL2 527 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 RBM48Q5RL73 367 aaKnown RBP5.39□□□□□ -1.55
SCLT1-207ENST00000506233 FAM46CQ5VWP2 391 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 ACSM2BQ68CK6 577 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 MFSD12Q6NUT3 480 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 PODNL1Q6PEZ8 512 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 ZNF836Q6ZNA1 936 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 MTSS1LQ765P7 747 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 PTPMT1Q8WUK0 201 aaPredicted RBP5.39□□□□□ -1.55
SCLT1-207ENST00000506233 NPIPB3Q92617 1050 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 SOSTQ9BQB4 213 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 MRI1Q9BV20 369 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 YTHDF1Q9BYJ9 559 aaKnown RBP5.39□□□□□ -1.55
SCLT1-207ENST00000506233 UBE2ZQ9H832 354 aaPredicted RBP5.39□□□□□ -1.55
SCLT1-207ENST00000506233 GIN1Q9NXP7 522 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 ICAM5Q9UMF0 924 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 ANGPTL3Q9Y5C1 460 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 PTPRBP23467 1997 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 CELSR1Q9NYQ6 3014 aa5.39□□□□□ -1.55
SCLT1-207ENST00000506233 GXYLT2A0PJZ3 443 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 OR5K3A6NET4 321 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 BHLHE40O14503 412 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 KIAA0513O60268 411 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 PAGE4O60829 102 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 MT-ND2P03891 347 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 BCHEP06276 602 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 TFPIP10646 304 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 MAKP20794 623 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 DRD5P21918 477 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 NOS3P29474 1203 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 GFERP55789 205 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 ST8SIA6P61647 398 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 IMPG1Q17R60 797 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 ARHGAP11BQ3KRB8 267 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 BHLHB9Q6PI77 547 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 C11orf88Q6PI97 169 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 ENPP7Q6UWV6 458 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 SNX29P2Q8IUI4 249 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 ERI1Q8IV48 349 aaKnown RBP5.38□□□□□ -1.55
SCLT1-207ENST00000506233 APLFQ8IW19 511 aaPredicted RBP5.38□□□□□ -1.55
SCLT1-207ENST00000506233 CATSPER1Q8NEC5 780 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 ST7LQ8TDW4 575 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 PROX1Q92786 737 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 ADIPOR1Q96A54 375 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 RMND5BQ96G75 393 aaPredicted RBP5.38□□□□□ -1.55
SCLT1-207ENST00000506233 LMF2Q9BU23 707 aaKnown RBP5.38□□□□□ -1.55
SCLT1-207ENST00000506233 RAB33BQ9H082 229 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 SAMD4AQ9UPU9 718 aaKnown RBP5.38□□□□□ -1.55
SCLT1-207ENST00000506233 CLCA3PQ9Y6N3 262 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 COMMD3-BMI1R4GMX3 469 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 LOC102723996A0A087X1L8 192 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 RNF103-CHMP3A0A140T963 221 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 AGFG2O95081 481 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 ZNF182P17025 639 aaPredicted RBP5.38□□□□□ -1.55
SCLT1-207ENST00000506233 THBS4P35443 961 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 TAGLN2P37802 199 aaKnown RBP5.38□□□□□ -1.55
SCLT1-207ENST00000506233 TGM4P49221 684 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 RAB8AP61006 207 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 GANABQ14697 944 aaKnown RBP5.38□□□□□ -1.55
SCLT1-207ENST00000506233 TOR1AIP1Q5JTV8 583 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 ZNF684Q5T5D7 378 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 SLX4IPQ5VYV7 408 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 CRYBG3Q68DQ2 2970 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 ASPHD2Q6ICH7 369 aa5.38□□□□□ -1.55
SCLT1-207ENST00000506233 TNFAIP8L2Q6P589 184 aaPredicted RBP5.38□□□□□ -1.55
SCLT1-207ENST00000506233 BEND4Q6ZU67 534 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms