RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 MMP26Q9NRE1 261 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 LAMP5Q9UJQ1 280 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 GSTK1Q9Y2Q3 226 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 KIF3AQ9Y496 699 aa2.42□□□□□ -2.02
CHD1-203ENST00000505657 A8MUA0 341 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 GNA14O95837 355 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 TNNI3P19429 210 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 TBXA2RP21731 343 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 SOX6P35712 828 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 NUDT1P36639 197 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 HSPA2P54652 639 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 CSNK1G2P78368 415 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 SLC10A7Q0GE19 358 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 MPPED2Q15777 294 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 PAGE3Q5JUK9 113 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 RIPPLY2Q5TAB7 128 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 RFLNAQ6ZTI6 216 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 ARCQ7LC44 396 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 C16orf62Q7Z3J2 963 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 VRK2Q86Y07 508 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 CENPLQ8N0S6 344 aaPredicted RBP2.41□□□□□ -2.02
CHD1-203ENST00000505657 MTURNQ8N3F0 131 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 GMCL1P1Q8NEA9 526 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 OR2T34Q8NGX1 318 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 OR56B4Q8NH76 319 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 PNPT1Q8TCS8 783 aaKnown RBP2.41□□□□□ -2.02
CHD1-203ENST00000505657 TRIM44Q96DX7 344 aaPredicted RBP2.41□□□□□ -2.02
CHD1-203ENST00000505657 PGLYRP4Q96LB8 373 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 C12orf66Q96MD2 445 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 TTC25Q96NG3 672 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 TBX15Q96SF7 602 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 ERP44Q9BS26 406 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 TMEM117Q9H0C3 514 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 RIBC2Q9H4K1 309 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 WDR76Q9H967 626 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 APMAPQ9HDC9 416 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.41□□□□□ -2.02
CHD1-203ENST00000505657 TBK1Q9UHD2 729 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 SNX6Q9UNH7 406 aa2.41□□□□□ -2.02
CHD1-203ENST00000505657 IGHV2-70DA0A0C4DH43 119 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 A0A1B0GUA9 196 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 A0A1B0GWJ7 208 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 G3V4G9 280 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 H0YCG3 227 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 CLDN5O00501 218 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 MAPK13O15264 365 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 PRKYO43930 277 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 TM7SF2O76062 418 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 INSP01308 110 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 IGHDP01880 384 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 CSF2P04141 144 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 IGKV3-11P04433 115 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 RBMY1CP0DJD4 496 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 TOP1P11387 765 aaKnown RBP2.4□□□□□ -2.03
CHD1-203ENST00000505657 RCC1P18754 421 aaPredicted RBP2.4□□□□□ -2.03
CHD1-203ENST00000505657 PGCP20142 388 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 ATP6V1C1P21283 382 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 CALB2P22676 271 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 PSMA5P28066 241 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 HPCAL1P37235 193 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 LEPP41159 167 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 ACADVLP49748 655 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 PRKXP51817 358 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 BIDP55957 195 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 CCDC173Q0VFZ6 552 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 SNTB2Q13425 540 aaKnown RBP2.4□□□□□ -2.03
CHD1-203ENST00000505657 CCDC57Q2TAC2 916 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 NADK2Q4G0N4 442 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 TMEM41BQ5BJD5 291 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 AGBL2Q5U5Z8 902 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 NCR3LG1Q68D85 454 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 CYB5R2Q6BCY4 276 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 CES3Q6UWW8 571 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 TBC1D21Q8IYX1 336 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 KIR3DL3Q8N743 410 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 ARIH2OSQ8N7S6 290 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 FADS6Q8N9I5 356 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 OR10T2Q8NGX3 314 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 MYLPFQ96A32 169 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 GAL3ST1Q99999 423 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 RHBGQ9H310 441 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 SIGLEC8Q9NYZ4 499 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 KLK12Q9UKR0 248 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 ALG6Q9Y672 507 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 CACNG2Q9Y698 323 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 ATP10DQ9P241 1426 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 FRMPD4Q14CM0 1322 aa2.4□□□□□ -2.03
CHD1-203ENST00000505657 ATAD2BQ9ULI0 1458 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 SCN2AQ99250 2005 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 MTCL1Q9Y4B5 1905 aaKnown RBP2.39□□□□□ -2.03
CHD1-203ENST00000505657 RSPH10B2B2RC85 870 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 GFYI3L273 518 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 MPHOSPH10O00566 681 aaKnown RBP2.39□□□□□ -2.03
CHD1-203ENST00000505657 MSH4O15457 936 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 OR1F1O43749 312 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 LALBAP00709 142 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 IGHV4-34P06331 123 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 RSPH10BP0C881 870 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 RNH1P13489 461 aaKnown RBP2.39□□□□□ -2.03
CHD1-203ENST00000505657 DRD5P21918 477 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms