RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ENKD1Q9H0I2 346 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 ZNF696Q9H7X3 374 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 GPN2Q9H9Y4 310 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 PNPLA3Q9NST1 481 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 PAK1IP1Q9NWT1 392 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 ZNF226Q9NYT6 803 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 KLK13Q9UKR3 277 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 RNF6Q9Y252 685 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 YARS2Q9Y2Z4 477 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 ORC6Q9Y5N6 252 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 WIF1Q9Y5W5 379 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 TRABD2BA6NFA1 517 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 ANKUB1A6NFN9 424 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 ENO4A6NNW6 628 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 LRRN3E7EW58 273 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 LCE2BO14633 110 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 EFNA2O43921 213 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 IFI30P13284 250 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 PRKCAP17252 672 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 CDH2P19022 906 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 SPINK2P20155 84 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 TACR3P29371 465 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 SLC1A3P43003 542 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 SLC6A8P48029 635 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 TMED10P49755 219 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 HLCSP50747 726 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 P2RX1P51575 399 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 CDH15P55291 814 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 ESRRGP62508 458 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 EFNB1P98172 346 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 CDK5Q00535 292 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 CDK5R2Q13319 367 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 BLMHQ13867 455 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 MAD2L1BPQ15013 274 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 SMN1Q16637 294 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 TBC1D25Q3MII6 688 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 ACER2Q5QJU3 275 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 ZNF787Q6DD87 383 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 OPN5Q6U736 354 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 ARSKQ6UWY0 536 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 THSD4Q6ZMP0 1018 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 RASSF6Q6ZTQ3 369 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 TMPRSS11FQ6ZWK6 438 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 THAP5Q7Z6K1 395 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 MISPQ8IVT2 679 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 RNF113BQ8IZP6 322 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 FADS6Q8N9I5 356 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 OR2M3Q8NG83 312 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 OR4Q3Q8NH05 313 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 B4GALNT2Q8NHY0 566 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 POC1BQ8TC44 478 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 PAQR8Q8TEZ7 354 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 DNAJA4Q8WW22 397 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 ASB15Q8WXK1 588 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 BPIFA2Q96DR5 249 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 THOC3Q96J01 351 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 MPP4Q96JB8 637 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 MOGAT1Q96PD6 335 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 RHNO1Q9BSD3 238 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 PTDSS2Q9BVG9 487 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 ANGPTL4Q9BY76 406 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 ZNF556Q9HAH1 456 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 SLC25A19Q9HC21 320 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 CPNE5Q9HCH3 593 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 ANKRD10Q9NXR5 420 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 MED11Q9P086 117 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 OSGIN1Q9UJX0 560 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 FBXL2Q9UKC9 423 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 SIGLEC7Q9Y286 467 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 MED31Q9Y3C7 131 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 GMPPBQ9Y5P6 360 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 TNRC6AQ8NDV7 1962 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 MED12Q93074 2177 aa6.27□□□□□ -1.41
TOPBP1-203ENST00000503464 TRAV27A0A087WT01 109 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 TMEM72A0PK05 275 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 ZC3H12DA2A288 527 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 MAGEA13PA6NCF6 341 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 UNC119BA6NIH7 251 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 TRIM64CA6NLI5 447 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 SHISA8B8ZZ34 492 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 G3V3Y1 287 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 SLC1A7O00341 560 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 NKX2-8O15522 239 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 EFSO43281 561 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 CDC40O60508 579 aaKnown RBP eCLIP6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 NPIPB7O75200 414 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 PTP4A3O75365 173 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 HTR1AP08908 422 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 ICAM2P13598 275 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 PGCP20142 388 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 IL11P20809 199 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 GSTM3P21266 225 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 CRHBPP24387 322 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 ITPKBP27987 946 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 POU1F1P28069 291 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 FMO3P31513 532 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 IFNA8P32881 189 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 IFNGR2P38484 337 aa6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 SUMO3P55854 103 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-203ENST00000503464 NUP107P57740 925 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms