RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 FITM1A5D6W6 292 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 SYNDIG1LA6NDD5 238 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 CCDC182A6NF36 153 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 SERINC4A6NH21 518 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 GTPBP1O00178 669 aaKnown RBP11.03□□□□□ -0.64
NUP54-202ENST00000502850 LALBAP00709 142 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 SERPINA3P01011 423 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 CSTAP01040 98 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 SBK2P0C263 348 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 CLEC2LP0C7M8 214 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 MYL9P24844 172 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 LCN1P31025 176 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 MAZP56270 477 aaKnown RBP11.03□□□□□ -0.64
NUP54-202ENST00000502850 CRYZQ08257 329 aaKnown RBP11.03□□□□□ -0.64
NUP54-202ENST00000502850 TCF15Q12870 199 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 ISXQ2M1V0 245 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 PYDC2Q56P42 97 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 SLC35F1Q5T1Q4 408 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 TRIQKQ629K1 86 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 ZNF517Q6ZMY9 492 aaPredicted RBP11.03□□□□□ -0.64
NUP54-202ENST00000502850 DGAT2L6Q6ZPD8 337 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 ZAR1Q86SH2 424 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 TPRA1Q86W33 373 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 CAMKK1Q8N5S9 505 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 ZFP41Q8N8Y5 198 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 CADM4Q8NFZ8 388 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 DOK4Q8TEW6 326 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 MVB12AQ96EY5 273 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 TEAD3Q99594 435 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 MAP3K3Q99759 626 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 RBCK1Q9BYM8 510 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 OR10A5Q9H207 317 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 SOHLH2Q9NX45 425 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 GMEB2Q9UKD1 530 aa11.03□□□□□ -0.64
NUP54-202ENST00000502850 TRAV27A0A087WT01 109 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 A0A1W2PQ09 198 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 HCRTR1O43613 425 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 IDH3BO43837 385 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 PPP1R3DO95685 299 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 PNMTP11086 282 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 SPNP16150 400 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 SLC2A5P22732 501 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 AZGP1P25311 298 aaKnown RBP11.02□□□□□ -0.64
NUP54-202ENST00000502850 SSTR4P31391 388 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 CD79BP40259 229 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 ADH7P40394 386 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 CASP3P42574 277 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 PPM1FP49593 454 aaPredicted RBP11.02□□□□□ -0.64
NUP54-202ENST00000502850 SLC16A1P53985 500 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 OR2B6P58173 313 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 HNRNPKP61978 463 aaKnown RBP eCLIP11.02□□□□□ -0.647e-6■□□□□ 8.5
NUP54-202ENST00000502850 RACK1P63244 317 aaKnown RBP11.02□□□□□ -0.64
NUP54-202ENST00000502850 PLAURQ03405 335 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 SLC35D3Q5M8T2 416 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 THSD4Q6ZMP0 1018 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 MED25Q71SY5 747 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 C17orf82Q86X59 251 aaPredicted RBP11.02□□□□□ -0.64
NUP54-202ENST00000502850 EGFL6Q8IUX8 553 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 SFTPA2Q8IWL1 248 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 CADM2Q8N3J6 435 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 MS4A15Q8N5U1 240 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 TMEM105Q8N8V8 129 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 SYT14Q8NB59 555 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 RCBTB1Q8NDN9 531 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 C19orf18Q8NEA5 215 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 IL17RDQ8NFM7 739 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 OR51A7Q8NH64 312 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 OR5W2Q8NH69 310 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 LMX1AQ8TE12 382 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 TP53INP1Q96A56 240 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 MMABQ96EY8 250 aaPredicted RBP11.02□□□□□ -0.64
NUP54-202ENST00000502850 AHCYL2Q96HN2 611 aaKnown RBP11.02□□□□□ -0.64
NUP54-202ENST00000502850 ATF6BQ99941 703 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 HDHD5Q9BXW7 423 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 IRF2BPLQ9H1B7 796 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 ADGRL4Q9HBW9 690 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 EXOSC3Q9NQT5 275 aaKnown RBP11.02□□□□□ -0.64
NUP54-202ENST00000502850 WNT16Q9UBV4 365 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 ICAM5Q9UMF0 924 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 ERVK-19Q9WJR5 959 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 ZNF337Q9Y3M9 751 aa11.02□□□□□ -0.64
NUP54-202ENST00000502850 WDFY4Q6ZS81 3184 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 A0A087WUJ7 227 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 A0A1W2PR77 199 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 METTL12A8MUP2 240 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 TMEM150CB9EJG8 249 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 PLPP2O43688 288 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 IGKV1D-16P01601 117 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 HLA-DQB1P01920 261 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 IFNA16P05015 189 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 KRT8P05787 483 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 CT45A8P0DMV1 189 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 CT45A9P0DMV2 189 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 PTNP21246 168 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 TALDO1P37837 337 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 PRPS1P60891 318 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 HSF2Q03933 536 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 CRMP1Q14194 572 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 GGTLC2Q14390 218 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms