RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 POLR2J3Q9H1A7 115 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 RNF122Q9H9V4 155 aa9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 SPAG4Q9NPE6 437 aa9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 CHST11Q9NPF2 352 aa9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 TIGARQ9NQ88 270 aa9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 KLHL28Q9NXS3 571 aa9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 TNFRSF10DQ9UBN6 386 aa9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 TESQ9UGI8 421 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 CHRNA9Q9UGM1 479 aa9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 TAGLN3Q9UI15 199 aa9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 FOXD3Q9UJU5 478 aaPredicted RBP9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 TRAPPC4Q9Y296 219 aa9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 HDGFL3Q9Y3E1 203 aa9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 PTPN13Q12923 2485 aa9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 SPTAN1Q13813 2472 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-212ENST00000502563 SPTBN1Q01082 2364 aaKnown RBP9.65□□□□□ -0.87
UBE2D3-212ENST00000502563 MED12Q93074 2177 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 ELOVL7A1L3X0 281 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 EFNA2O43921 213 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 TOXO94900 526 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 PMS2P2O95744 297 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 LGI1O95970 557 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 GP1BBP13224 206 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 IL11P20809 199 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 OPRM1P35372 400 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 KCNJ5P48544 419 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 STARP49675 285 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 NUDT2P50583 147 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 CCR4P51679 360 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 POLR2HP52434 150 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 SUCLG1P53597 346 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 CLDN20P56880 219 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 COPZ1P61923 177 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 PMPCAQ10713 525 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 NRF1Q16656 503 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 NDUFAF6Q330K2 333 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 SYT14P1Q58G82 188 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 GTF2IRD2BQ6EKJ0 949 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 CHMP1BQ7LBR1 199 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 GTF2IRD2Q86UP8 949 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 ADGRG3Q86Y34 549 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 ARMC8Q8IUR7 673 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 PGAM4Q8N0Y7 254 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 ARHGAP24Q8N264 748 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 SLC43A2Q8N370 569 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 CLIP4Q8N3C7 705 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 RPRMLQ8N4K4 120 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 FITM2Q8N6M3 262 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 POU5F2Q8N7G0 328 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 OR2T12Q8NG77 320 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 OR52E4Q8NGH9 312 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 OR2V1Q8NHB1 315 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 ZNF563Q8TA94 476 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 DNAJA4Q8WW22 397 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 ZNF524Q96C55 264 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 NPAS1Q99742 590 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 KLHDC3Q9BQ90 382 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 TACO1Q9BSH4 297 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 RSPO3Q9BXY4 272 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 POTEKPQ9BYX7 375 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 C1orf21Q9H246 121 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 ALG2Q9H553 416 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 TMEM181Q9P2C4 612 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 SH3BGRL2Q9UJC5 107 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 MCTS1Q9ULC4 181 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 PCNX1Q96RV3 2341 aa9.64□□□□□ -0.87
UBE2D3-212ENST00000502563 DOPEY2Q9Y3R5 2298 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 A0A0G2JNJ9 132 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 SLC22A20A6NK97 555 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 M0QX08 132 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 DVL2O14641 736 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 AIM2O14862 343 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 ZNHIT1O43257 154 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 NPIPB7O75200 414 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 RNF224P0DH78 156 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 HSD17B1P14061 328 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 CTSSP25774 331 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 IDH2P48735 452 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 ZNF136P52737 540 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 CRYBA2P53672 197 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 CSNK2A1P68400 391 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 DMTNQ08495 405 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 MERTKQ12866 999 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 SF3A3Q12874 501 aaKnown RBP eCLIP9.63□□□□□ -0.876e-16■□□□□ 8.6
UBE2D3-212ENST00000502563 PDK3Q15120 406 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 RNPS1Q15287 305 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 POMZP3Q6PJE2 187 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 TMPPEQ6ZT21 453 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 MICU2Q8IYU8 434 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 OR6S1Q8NH40 331 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 OR10D3Q8NH80 312 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 BCAS4Q8TDM0 211 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 RNF128Q8TEB7 428 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 CA5BP1Q8WTZ4 195 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 GMPPAQ96IJ6 420 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 DOCK7Q96N67 2140 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 TRIB1Q96RU8 372 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 ARHGDIGQ99819 225 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 ZNF559Q9BR84 538 aa9.63□□□□□ -0.87
UBE2D3-212ENST00000502563 TRIM2Q9C040 744 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms