RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	HOXB9	P17482	250 aa	Predicted RBP	9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	IL11	P20809	199 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	KIR2DL2	P43627	348 aa	Predicted RBP	9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	ARFIP2	P53365	341 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	RAC3	P60763	192 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	COPZ1	P61923	177 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	CSNK2A1	P68400	391 aa	Predicted RBP	9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	GUSBP1	Q15486	140 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF239	Q16600	458 aa	Known RBP	9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	GTDC1	Q4AE62	458 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	TMEM201	Q5SNT2	666 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	MRPL2	Q5T653	305 aa	Known RBP	9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	RNF220	Q5VTB9	566 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	PLXDC2	Q6UX71	529 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	PLEKHM3	Q6ZWE6	761 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	OLIG3	Q7RTU3	272 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	STK32C	Q86UX6	486 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	KRT73	Q86Y46	540 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	DPP10	Q8N608	796 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	ATP6V1C2	Q8NEY4	427 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	OR6K3	Q8NGY3	331 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	BBS10	Q8TAM1	723 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC35B4	Q969S0	331 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	THOC1	Q96FV9	657 aa	Known RBP	9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	TMEM19	Q96HH6	336 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	NPAS1	Q99742	590 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	SPATA5L1	Q9BVQ7	753 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	TMEM120A	Q9BXJ8	343 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF385D	Q9H6B1	395 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC52A3	Q9NQ40	469 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	DNAJB12	Q9NXW2	375 aa	Known RBP	9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	CHRNA9	Q9UGM1	479 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	NDRG3	Q9UGV2	375 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	EDAR	Q9UNE0	448 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	HDGFL3	Q9Y3E1	203 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	ABCA12	Q86UK0	2595 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	ANKHD1	Q8IWZ3	2542 aa	Known RBP	9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	CLDN24	A6NM45	220 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	DNPH1	O43598	174 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	EFNA2	O43921	213 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	PRKD3	O94806	890 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	C1QC	P02747	245 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	OPN1LW	P04000	364 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	EPX	P11678	715 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	GPX2	P18283	190 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	ADSL	P30566	484 aa	Predicted RBP	9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	RYK	P34925	604 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	CPOX	P36551	454 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC1A3	P43003	542 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	IDH2	P48735	452 aa	Known RBP	9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	POLR2H	P52434	150 aa	Known RBP	9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	SIRPA	P78324	504 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	MAPRE2	Q15555	327 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	SYT14P1	Q58G82	188 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	PAGE3	Q5JUK9	113 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	GCNT6	Q5T4J0	391 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	REEP3	Q6NUK4	255 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	BTLA	Q7Z6A9	289 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	RNF128	Q8TEB7	428 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	CNOT9	Q92600	299 aa	Known RBP	9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	ZHX1-C8orf76	Q96EF9	292 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	LURAP1	Q96LR2	239 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	DACH2	Q96NX9	599 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	OR5B2	Q96R09	309 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	SH3GL1	Q99961	368 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	KLHDC3	Q9BQ90	382 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	CCDC106	Q9BWC9	280 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	SPATA9	Q9BWV2	254 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	TMEM38A	Q9H6F2	299 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	PLSCR4	Q9NRQ2	329 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	FGFR1OP2	Q9NVK5	253 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	GALNT8	Q9NY28	637 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC25A37	Q9NYZ2	338 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	CRIM1	Q9NZV1	1036 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	VAPA	Q9P0L0	249 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	SLAMF8	Q9P0V8	285 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	KLHL9	Q9P2J3	617 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF443	Q9Y2A4	671 aa	Predicted RBP	9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	TACC2	O95359	2948 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	LRBA	P50851	2863 aa		9.41	□□□□□ -0.9
FXR1-222	ENST00000498658	TRBV5-3	A0A0A0MS03	114 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	CASK	O14936	926 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF208	O43345	1280 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	SERPINB7	O75635	380 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	PGM3	O95394	542 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	NPPA	P01160	153 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	CGA	P01215	116 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	TFPI	P10646	304 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	ENPP1	P22413	925 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC6A2	P23975	617 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	SHC1	P29353	583 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	PRKAR1B	P31321	381 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	CD79B	P40259	229 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	MDH1	P40925	334 aa	Known RBP	9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	KCNJ5	P48544	419 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	CDK6	Q00534	326 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	GUCY1A3	Q02108	690 aa		9.4	□□□□□ -0.9
FXR1-222	ENST00000498658	RBBP4	Q09028	425 aa		9.4	□□□□□ -0.9

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