RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SEC14L5O43304 696 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 CHP2O43745 196 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 ZIC3O60481 467 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 SEMA7AO75326 666 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 FKBP6O75344 327 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 ENTPD5O75356 428 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 OR5F1O95221 314 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 POU3F2P20265 443 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-227ENST00000498056 HTR3AP46098 478 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 CDH12P55289 794 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 PIN1Q13526 163 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-227ENST00000498056 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.27□□□□□ -0.45
CPNE1-227ENST00000498056 FGD3Q5JSP0 725 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 AAGABQ6PD74 315 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 ZNF613Q6PF04 617 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 UBQLNLQ8IYU4 475 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 LSMEM1Q8N8F7 131 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 NEIL3Q8TAT5 605 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 PHF10Q8WUB8 498 aaKnown RBP12.27□□□□□ -0.45
CPNE1-227ENST00000498056 FAR1Q8WVX9 515 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 PYDC1Q8WXC3 89 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 C7orf34Q96L11 122 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 GPR137Q96N19 417 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 BBC3Q96PG8 261 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-227ENST00000498056 FNDC11Q9BVV2 318 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 POLR2J2Q9GZM3 115 aaKnown RBP12.27□□□□□ -0.45
CPNE1-227ENST00000498056 POLR2J3Q9H1A7 115 aaKnown RBP12.27□□□□□ -0.45
CPNE1-227ENST00000498056 IL1RAPQ9NPH3 570 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 ASF1BQ9NVP2 202 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 TNFRSF10DQ9UBN6 386 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 OSGIN1Q9UJX0 560 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 A4GNTQ9UNA3 340 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 TMED7Q9Y3B3 224 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 SPIN1Q9Y657 262 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-227ENST00000498056 ZFYVE26Q68DK2 2539 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 H0YHG0 523 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 SUSD5O60279 629 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 TIPRLO75663 272 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 IGHG3P01860 377 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 RHCEP18577 417 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 IL11P20809 199 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 CXCR1P25024 350 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 RRM2P31350 389 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 SFTPDP35247 375 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 MAGEA2P43356 314 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 MLLT10P55197 1068 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 B3GALT5-AS1P59052 145 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 SLC25A53Q5H9E4 307 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 DCST1Q5T197 706 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 SWT1Q5T5J6 900 aaKnown RBP12.26□□□□□ -0.45
CPNE1-227ENST00000498056 ULK3Q6PHR2 472 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 GDF7Q7Z4P5 450 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 ATG4DQ86TL0 474 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-227ENST00000498056 GHDCQ8N2G8 530 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 CPT1CQ8TCG5 803 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 DNAJA4Q8WW22 397 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-227ENST00000498056 SLCO4A1Q96BD0 722 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 DNAJA3Q96EY1 480 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 PIP5K1AQ99755 562 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 CHID1Q9BWS9 393 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 YY1AP1Q9H869 796 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 ACKR4Q9NPB9 350 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 SERINC1Q9NRX5 453 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 SPRR3Q9UBC9 169 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 CHRNA9Q9UGM1 479 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 RIMS3Q9UJD0 308 aa12.26□□□□□ -0.45
CPNE1-227ENST00000498056 MRPS18CQ9Y3D5 142 aaKnown RBP12.26□□□□□ -0.45
CPNE1-227ENST00000498056 PHF3Q92576 2039 aaKnown RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 DOCK7Q96N67 2140 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 A0A1B0GTH9 108 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 TMEM72A0PK05 275 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 ETV2O00321 342 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 KPNA4O00629 521 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 FFAR1O14842 300 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 HCN1O60741 890 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 NTN1O95631 604 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 CST1P01037 141 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 OPN1LWP04000 364 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 THY1P04216 161 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 PRB1P04280 392 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 H1F0P07305 194 aaKnown RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 TFPIP10646 304 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 HOXB6P17509 224 aaKnown RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 CHMP24386 653 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 SLC7A1P30825 629 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 APOBEC1P41238 236 aaKnown RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 TDGF1P3P51864 188 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 GFRA1P56159 465 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 ST3GAL3Q11203 375 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 C3AR1Q16581 482 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 TMEM44Q2T9K0 475 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 GLYR1Q49A26 553 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 WDR88Q6ZMY6 472 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 PRICKLE2Q7Z3G6 844 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 TSEN54Q7Z6J9 526 aaKnown RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 LSM14AQ8ND56 463 aaKnown RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 SLC25A43Q8WUT9 341 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 ABTB1Q969K4 478 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 ZNF347Q96SE7 839 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 SLX1AQ9BQ83 275 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms