RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 LCN8Q6JVE9 175 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 ARHGAP11AQ6P4F7 1023 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 GFRALQ6UXV0 394 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 VTCN1Q7Z7D3 282 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 OR6T1Q8NGN1 323 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 PYURFQ96I23 114 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 HSH2DQ96JZ2 352 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 MRGPRX4Q96LA9 322 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 MCHR1Q99705 422 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 WFDC6Q9BQY6 131 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 ZNF559Q9BR84 538 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 TRIM2Q9C040 744 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 TMEM27Q9HBJ8 222 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 STOML1Q9UBI4 398 aa18.12■□□□□ 0.49
CTSD-206ENST00000497544 SHANK1Q9Y566 2161 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 PCNX1Q96RV3 2341 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 A0A1B0GVC2 190 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 OR2M5A3KFT3 312 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 SHISA8B8ZZ34 492 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 ACOT8O14734 319 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 PRKD3O94806 890 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 ATP6V1B2P21281 511 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 CHMP24386 653 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 HTR3AP46098 478 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 ZNF136P52737 540 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 HSF1Q00613 529 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 MERTKQ12866 999 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 FOXF1Q12946 379 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 SLC25A53Q5H9E4 307 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 ENPP6Q6UWR7 440 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 GRINAQ7Z429 371 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 LACC1Q8IV20 430 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 GTPBP8Q8N3Z3 284 aaPredicted RBP18.11■□□□□ 0.49
CTSD-206ENST00000497544 GALNT11Q8NCW6 608 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 OR4D11Q8NGI4 311 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 POC1BQ8TC44 478 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 GEMIN6Q8WXD5 167 aaKnown RBP18.11■□□□□ 0.49
CTSD-206ENST00000497544 ABTB1Q969K4 478 aaPredicted RBP18.11■□□□□ 0.49
CTSD-206ENST00000497544 SARAFQ96BY9 339 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 ZNF524Q96C55 264 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 PRR14Q9BWN1 585 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 PLSCR2Q9NRY7 297 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 SLC7A8Q9UHI5 535 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 POMPQ9Y244 141 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 V9GYQ6 96 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 MED13LQ71F56 2210 aa18.11■□□□□ 0.49
CTSD-206ENST00000497544 C7orf72A4D263 438 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 AQP7O14520 342 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 ACTL6AO96019 429 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 ZNF17P17021 662 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 BMP7P18075 431 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 SLC1A3P43003 542 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 B3GALT5-AS1P59052 145 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 FLOT2Q14254 428 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 OR1Q1Q15612 314 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 TMEM44Q2T9K0 475 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 PLEKHM3Q6ZWE6 761 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 RBM45Q8IUH3 476 aaKnown RBP18.1■□□□□ 0.49
CTSD-206ENST00000497544 POP5Q969H6 163 aaKnown RBP18.1■□□□□ 0.49
CTSD-206ENST00000497544 NPAS1Q99742 590 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 SERINC1Q9NRX5 453 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 SELENONQ9NZV5 590 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 ZNF337Q9Y3M9 751 aa18.1■□□□□ 0.49
CTSD-206ENST00000497544 NPIPA2E9PIF3 369 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 NPIPA3F8WFD2 350 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 TPST2O60704 377 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 FMO6PO60774 539 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 CIB2O75838 187 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 TACR3P29371 465 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 PTGS2P35354 604 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 APOBEC1P41238 236 aaKnown RBP18.09■□□□□ 0.49
CTSD-206ENST00000497544 STARP49675 285 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 GFRA1P56159 465 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 RBPJQ06330 500 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 POMZP3Q6PJE2 187 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 DEF8Q6ZN54 512 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 LSMEM1Q8N8F7 131 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 RNF217Q8TC41 542 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 UGT2B28Q9BY64 529 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 ADAM19Q9H013 955 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 CTPS2Q9NRF8 586 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 ACAD8Q9UKU7 415 aa18.09■□□□□ 0.49
CTSD-206ENST00000497544 OR14I1A6ND48 311 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 CPSF4LA6NMK7 179 aaKnown RBP18.08■□□□□ 0.48
CTSD-206ENST00000497544 H3BML4 177 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 ETV2O00321 342 aaPredicted RBP18.08■□□□□ 0.48
CTSD-206ENST00000497544 IFNW1P05000 195 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 PEPDP12955 493 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 ABOP16442 354 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 HTR2AP28223 471 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 IFNA8P32881 189 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 POLR2HP52434 150 aaKnown RBP18.08■□□□□ 0.48
CTSD-206ENST00000497544 RAC1P63000 192 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 NPTX1Q15818 432 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.08■□□□□ 0.48
CTSD-206ENST00000497544 NHSL2Q5HYW2 709 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 ENTPD8Q5MY95 495 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 VASNQ6EMK4 673 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 ST6GALNAC3Q8NDV1 305 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 ATP6V1C2Q8NEY4 427 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms