RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 KALRNO60229 2985 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CDHR4A6H8M9 788 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CLDN24A6NM45 220 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 C17orf51A8MQB3 221 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 FAM47E-STBD1D6RA91 191 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CXCR6O00574 342 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 GMFGO60234 142 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 GCM2O75603 506 aaPredicted RBP9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 TRAPPC6AO75865 159 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 DNAJC8O75937 253 aaPredicted RBP9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 MFN2O95140 757 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 NUDT14O95848 222 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 OPN1SWP03999 348 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 RFPL3SP0C7P2 107 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 GGT1P19440 569 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ME2P23368 584 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 SRD5A2P31213 254 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 KDELR2P33947 212 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 MAGEA5P43359 124 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CCR4P51679 360 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 SUMO3P55854 103 aaPredicted RBP9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 DSCR4P56555 118 aaPredicted RBP9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 EEF1A1P68104 462 aaKnown RBP9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 DMTNQ08495 405 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 BNIP2Q12982 314 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 SKP2Q13309 424 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CBFBQ13951 182 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CEACAM7Q14002 265 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 GANABQ14697 944 aaKnown RBP9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 SLC10A1Q14973 349 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 NDUFAF6Q330K2 333 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 LRRC23Q53EV4 343 aaPredicted RBP9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 GLYATQ6IB77 296 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 DHRS4L2Q6PKH6 230 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CBLN3Q6UW01 205 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 GRAMD2AQ8IUY3 354 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ZNF440Q8IYI8 595 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 FAM156AQ8NDB6 213 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 FAM71CQ8NEG0 241 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 TOR1AIP2Q8NFQ8 470 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 FAR1Q8WVX9 515 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 NR4A3Q92570 626 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 FAM162AQ96A26 154 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 MCUR1Q96AQ8 359 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 THTPAQ9BU02 230 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 PINK1Q9BXM7 581 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 KRTAP4-11Q9BYQ6 195 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 LAT2Q9GZY6 243 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 UBQLN3Q9H347 655 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 EXOSC3Q9NQT5 275 aaKnown RBP9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 OLAHQ9NV23 265 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ASF1BQ9NVP2 202 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 KLHL28Q9NXS3 571 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 MAGEL2Q9UJ55 1249 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 DKKL1Q9UK85 242 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 FBXL2Q9UKC9 423 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 SLC13A4Q9UKG4 626 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ICAM5Q9UMF0 924 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 NTNG1Q9Y2I2 539 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ATRXP46100 2492 aa9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 PRRC2CQ9Y520 2896 aaKnown RBP9.17□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ANKUB1A6NFN9 424 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 B4DXG7 233 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 SUV39H1O43463 412 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 HPNP05981 417 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 UQCRBP14927 111 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 NCK1P16333 377 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 PGCP20142 388 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 DPP4P27487 766 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 SLC6A8P48029 635 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 KCNJ5P48544 419 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ZNF41P51814 821 aaPredicted RBP9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 FXNQ16595 210 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 SOWAHCQ53LP3 525 aaPredicted RBP9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 PRR30Q53SZ7 412 aaPredicted RBP9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ZNF324BQ6AW86 544 aaPredicted RBP9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ZNF550Q7Z398 422 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CLIP4Q8N3C7 705 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 SMYD1Q8NB12 490 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 FAM83FQ8NEG4 500 aaPredicted RBP9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 OR5W2Q8NH69 310 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CPT1CQ8TCG5 803 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 LZICQ8WZA0 190 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CNOT9Q92600 299 aaKnown RBP9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 SLC35B4Q969S0 331 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 TAMM41Q96BW9 452 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 C1GALT1C1Q96EU7 318 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CDADC1Q9BWV3 514 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 DEFB127Q9H1M4 99 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 LRMDAQ9H2I8 198 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 MUC13Q9H3R2 512 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 EVA1AQ9H8M9 152 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ZDHHC11Q9H8X9 412 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ACKR4Q9NPB9 350 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 RLIMQ9NVW2 624 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 ADPRHL2Q9NX46 363 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 BAG5Q9UL15 447 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 MRPS18CQ9Y3D5 142 aaKnown RBP9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 CHST2Q9Y4C5 530 aa9.16□□□□□ -0.94
RAB11FIP3-211ENST00000495663 SNX13Q9Y5W8 968 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms