RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 MALT1Q9UDY8 824 aa13.24□□□□□ -0.29
NUP58-214ENST00000495460 GDF2Q9UK05 429 aaPredicted RBP13.24□□□□□ -0.29
NUP58-214ENST00000495460 IGHV4-30-2A0A087WSY4 118 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 SERINC4A6NH21 518 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 OIP5O43482 229 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 SSX4O60224 188 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 NPHS1O60500 1241 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 NDUFS7O75251 213 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 PMS2P2O95744 297 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 LINC00032P0C843 101 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 DHRS4L1P0CG22 281 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 UBL4AP11441 157 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 PRPS1L1P21108 318 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 SERPINB5P36952 375 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 DIO1P49895 249 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 MMP16P51512 607 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 NUDT6P53370 316 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 RPL38P63173 70 aaKnown RBP13.23□□□□□ -0.29
NUP58-214ENST00000495460 IRX1P78414 480 aaPredicted RBP13.23□□□□□ -0.29
NUP58-214ENST00000495460 FAPQ12884 760 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 SKP2Q13309 424 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 QPRTQ15274 297 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 TIGD2Q4W5G0 525 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 XKR7Q5GH72 579 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 ABLIM2Q6H8Q1 611 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 ALKBH2Q6NS38 261 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 ATG4DQ86TL0 474 aaPredicted RBP13.23□□□□□ -0.29
NUP58-214ENST00000495460 RIMKLAQ8IXN7 391 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 ZNF100Q8IYN0 542 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 MUC15Q8N387 334 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 C17orf53Q8N3J3 647 aaPredicted RBP13.23□□□□□ -0.29
NUP58-214ENST00000495460 C17orf78Q8N4C9 275 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 MIPOL1Q8TD10 442 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 AMBRA1Q9C0C7 1298 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 EML4Q9HC35 981 aaKnown RBP13.23□□□□□ -0.29
NUP58-214ENST00000495460 POLE3Q9NRF9 147 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 MKS1Q9NXB0 559 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 TAS2R16Q9NYV7 291 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 NPAP1Q9NZP6 1156 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 TBK1Q9UHD2 729 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 PRSS50Q9UI38 385 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 TRAPPC4Q9Y296 219 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 HDGFL3Q9Y3E1 203 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 TRAF6Q9Y4K3 522 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 SLC25A15Q9Y619 301 aa13.23□□□□□ -0.29
NUP58-214ENST00000495460 SPIN1Q9Y657 262 aaPredicted RBP13.23□□□□□ -0.29
NUP58-214ENST00000495460 FAM234BA2RU67 622 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 E7EQL1 145 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 SULT2B1O00204 365 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 COPEO14579 308 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 PHF1O43189 567 aaPredicted RBP13.22□□□□□ -0.29
NUP58-214ENST00000495460 STX11O75558 287 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 AGR2O95994 175 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 LAMP1P11279 417 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 PGCP20142 388 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 CD40P25942 277 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 EFNA4P52798 201 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 H3F3AP84243 136 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 SMU1Q2TAY7 513 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 ARHGAP11BQ3KRB8 267 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 SYT14P1Q58G82 188 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 CYB5R2Q6BCY4 276 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 EIF3MQ7L2H7 374 aaKnown RBP13.22□□□□□ -0.29
NUP58-214ENST00000495460 FBXL14Q8N1E6 418 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 ZNF619Q8N2I2 560 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 CEP112Q8N8E3 955 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 FAM71CQ8NEG0 241 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 C1orf162Q8NEQ5 155 aaPredicted RBP13.22□□□□□ -0.29
NUP58-214ENST00000495460 FBXO30Q8TB52 745 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 ZNF524Q96C55 264 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 INPP5KQ9BT40 448 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 GATA5Q9BWX5 397 aaPredicted RBP13.22□□□□□ -0.29
NUP58-214ENST00000495460 BEX2Q9BXY8 128 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 PIF1Q9H611 641 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 ANKZF1Q9H8Y5 726 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 PARPBPQ9NWS1 579 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 ASB6Q9NWX5 421 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 DCTN4Q9UJW0 460 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 PTGDR2Q9Y5Y4 395 aa13.22□□□□□ -0.29
NUP58-214ENST00000495460 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.22□□□□□ -0.293e-9■■■■■ 34.7
NUP58-214ENST00000495460 A0A1W2PNR3 127 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 ZNF716A6NP11 495 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 PDLIM1O00151 329 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 NDUFS8O00217 210 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 GPRIN2O60269 458 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 SESN3P58005 492 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 CHRNB3Q05901 458 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 STK11Q15831 433 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 C10orf107Q8IVU9 208 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 OR7A2PQ8NGA2 310 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 PIGXQ8TBF5 258 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 APH1AQ96BI3 265 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 ZHX1-C8orf76Q96EF9 292 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 ZIM3Q96PE6 472 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 OR5B2Q96R09 309 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 ZNF300Q96RE9 604 aaPredicted RBP13.21□□□□□ -0.29
NUP58-214ENST00000495460 CCDC106Q9BWC9 280 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 CACNG6Q9BXT2 260 aa13.21□□□□□ -0.29
NUP58-214ENST00000495460 SAP130Q9H0E3 1048 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms