RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ALPIP09923 528 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 CD8BP10966 210 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 APEHP13798 732 aaKnown RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 ATF1P18846 271 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 CELP19835 753 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 RAB5AP20339 215 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 DPP4P27487 766 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 FAUP35544 74 aaKnown RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 CTSOP43234 321 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 OR1E2P47887 323 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 ZNF177Q13360 481 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 DOK7Q18PE1 504 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 IL31Q6EBC2 164 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 C11orf87Q6NUJ2 197 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 CXXC5Q7LFL8 322 aaKnown RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 C9orf40Q8IXQ3 194 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 LNX2Q8N448 690 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 RELL2Q8NC24 303 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 ABHD4Q8TB40 342 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 RNF141Q8WVD5 230 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 NUDCD2Q8WVJ2 157 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 ECHDC3Q96DC8 303 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 WDR34Q96EX3 536 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 OR1F2PQ96R84 312 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 SSX3Q99909 188 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 SLC12A9Q9BXP2 914 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 OR10A4Q9H209 315 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 MYNNQ9NPC7 610 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 KRCC1Q9NPI7 259 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 VPS29Q9UBQ0 182 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 LRFN2Q9ULH4 789 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 RCE1Q9Y256 329 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 KPTNQ9Y664 436 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 SYNJ2BP-COX16A0A087WUM0 186 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 CCDC187A0A096LP49 1063 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 TEX13DA0A0J9YY54 714 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 C2orf92A0A1B0GVN3 265 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 A0A1B0GW64 132 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 A0A1W2PPE3 182 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 TMEM200CA6NKL6 621 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 SPDEFO95238 335 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 TRBC1P01850 177 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 F11P03951 625 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 GBAP04062 536 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 C8GP07360 202 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 ANXA5P08758 320 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 IGFBP1P08833 259 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 PRSS56P0CW18 603 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 ACP5P13686 325 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 TNFRSF1BP20333 461 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 NT5EP21589 574 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 AOAHP28039 575 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 SHC1P29353 583 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 FRKP42685 505 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 GLP1RP43220 463 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 LILRA4P59901 499 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 RAB1AP62820 205 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 EIF5AP63241 154 aaKnown RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 NHLH2Q02577 135 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 RHEBQ15382 184 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 THEM4Q5T1C6 240 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 GRHL2Q6ISB3 625 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 ADCK2Q7Z695 626 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 TRAPPC12Q8WVT3 735 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 ACOT11Q8WXI4 607 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 MRPS31Q92665 395 aaKnown RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 TRIM43Q96BQ3 446 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 SLC25A38Q96DW6 304 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 NEURL3Q96EH8 262 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 WDR89Q96FK6 387 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 PRRC1Q96M27 445 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 VRK1Q99986 396 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 WDR77Q9BQA1 342 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 RSPO3Q9BXY4 272 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 GPR61Q9BZJ8 451 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 TMEM30AQ9NV96 361 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 COX16Q9P0S2 106 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 IL20RAQ9UHF4 553 aa4.45□□□□□ -1.7
PRKD3-210ENST00000494667 YBX2Q9Y2T7 364 aaKnown RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 SIRT4Q9Y6E7 314 aaPredicted RBP4.45□□□□□ -1.7
PRKD3-210ENST00000494667 UNC119BA6NIH7 251 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 ZNF879B4DU55 563 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 TCAPO15273 167 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 KCNQ2O43526 872 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 CTNSO60931 367 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 CRTAPO75718 401 aaPredicted RBP4.44□□□□□ -1.7
PRKD3-210ENST00000494667 SLC25A27O95847 323 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 IGLV3-27P01718 113 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 MT-ND5P03915 603 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 SPARCP09486 303 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 ADRB3P13945 408 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 CSRP1P21291 193 aaKnown RBP4.44□□□□□ -1.7
PRKD3-210ENST00000494667 LMO1P25800 156 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 NDUFS1P28331 727 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 VIPR1P32241 457 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 MC4RP32245 332 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 FEN1P39748 380 aaKnown RBP4.44□□□□□ -1.7
PRKD3-210ENST00000494667 RGS8P57771 180 aaPredicted RBP4.44□□□□□ -1.7
PRKD3-210ENST00000494667 PRR5P85299 388 aa4.44□□□□□ -1.7
PRKD3-210ENST00000494667 CCDC85BQ15834 202 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms