RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 AGTR1P30556 359 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 CCKARP32238 428 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 CD79BP40259 229 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 PEX19P40855 299 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 EEF1A1P68104 462 aaKnown RBP13.12□□□□□ -0.31
ATG4B-224ENST00000494132 EEF1A1P5Q5VTE0 462 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 FBXW10Q5XX13 1052 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 ANKRD34AQ69YU3 496 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 CGB2Q6NT52 195 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 GRINAQ7Z429 371 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 CDH24Q86UP0 819 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 TUSC5Q8IXB3 177 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 CLIP4Q8N3C7 705 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 OR6K3Q8NGY3 331 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 RNF128Q8TEB7 428 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 FAM222BQ8WU58 562 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 OIT3Q8WWZ8 545 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 CPNE4Q96A23 557 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-224ENST00000494132 ZC3HAV1LQ96H79 300 aaKnown RBP13.12□□□□□ -0.31
ATG4B-224ENST00000494132 ARL5BQ96KC2 179 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 CCDC106Q9BWC9 280 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 KLHL4Q9C0H6 718 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 CLEC4MQ9H2X3 399 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-224ENST00000494132 LIME1Q9H400 295 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 TIGARQ9NQ88 270 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 EXOSC3Q9NQT5 275 aaKnown RBP13.12□□□□□ -0.31
ATG4B-224ENST00000494132 KLHL28Q9NXS3 571 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 ZNF443Q9Y2A4 671 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-224ENST00000494132 CHST2Q9Y4C5 530 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 TRBV5-3A0A0A0MS03 114 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 A0A1W2PP18 115 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 SH3D21A4FU49 640 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 TMEM247A6NEH6 219 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 FRS3O43559 492 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 CD8BP10966 210 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 TACR3P29371 465 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 EPS8Q12929 822 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 GNA13Q14344 377 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 LIN52Q52LA3 116 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 SYT14P1Q58G82 188 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.11□□□□□ -0.31
ATG4B-224ENST00000494132 NUFIP2Q7Z417 695 aaKnown RBP13.11□□□□□ -0.31
ATG4B-224ENST00000494132 ADGRG3Q86Y34 549 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 CMIPQ8IY22 773 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 NFKBIDQ8NI38 313 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 ZNF775Q96BV0 537 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-224ENST00000494132 RAD21L1Q9H4I0 556 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 SERINC1Q9NRX5 453 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 RASSF1Q9NS23 344 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 CALML5Q9NZT1 146 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 CHRNA9Q9UGM1 479 aa13.11□□□□□ -0.31
ATG4B-224ENST00000494132 HRNRQ86YZ3 2850 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-224ENST00000494132 TMED7-TICAM2A0A0A6YYA0 188 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 TMEM72A0PK05 275 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 CDHR4A6H8M9 788 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 CFAP73A6NFT4 308 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 C5orf58C9J3I9 102 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 SULT2B1O00204 365 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 SMAD9O15198 467 aaKnown RBP13.1□□□□□ -0.31
ATG4B-224ENST00000494132 FESP07332 822 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 VIMP08670 466 aaKnown RBP13.1□□□□□ -0.31
ATG4B-224ENST00000494132 PRG2P13727 222 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 UGT2B10P36537 528 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 MAGEA8P43361 318 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 DIO1P49895 249 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 RAC3P60763 192 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 FADDQ13158 208 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 SELPLGQ14242 412 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 HSP90B2PQ58FF3 399 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 ZNF311Q5JNZ3 666 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 TMEM201Q5SNT2 666 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 GCNT6Q5T4J0 391 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 DLEU7Q6UYE1 221 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 TMPPEQ6ZT21 453 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 C22orf34Q6ZV56 151 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 DHDDSQ86SQ9 333 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 RETREG3Q86VR2 466 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 CADM2Q8N3J6 435 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 WFIKKN1Q96NZ8 548 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 ZNF300Q96RE9 604 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-224ENST00000494132 RABEP2Q9H5N1 569 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 A4GALTQ9NPC4 353 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 C6orf203Q9P0P8 240 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-224ENST00000494132 KLHL13Q9P2N7 655 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 LEF1Q9UJU2 399 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-224ENST00000494132 OSGIN1Q9UJX0 560 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 TRIM33Q9UPN9 1127 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 NDUFAF1Q9Y375 327 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 TMED7Q9Y3B3 224 aa13.1□□□□□ -0.31
ATG4B-224ENST00000494132 A0A0G2JPF8 293 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 ZC3H12DA2A288 527 aaKnown RBP13.09□□□□□ -0.31
ATG4B-224ENST00000494132 FAM221AA4D161 298 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 HNRNPCL2B2RXH8 293 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 HNRNPCL3B7ZW38 293 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 ANGPT2O15123 496 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 HNRNPCL1O60812 293 aaKnown RBP13.09□□□□□ -0.31
ATG4B-224ENST00000494132 PRKD3O94806 890 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 PABPC4LP0CB38 370 aaKnown RBP13.09□□□□□ -0.31
ATG4B-224ENST00000494132 HNRNPCL4P0DMR1 293 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 ARAFP10398 606 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms