RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TNFAIP8L2Q6P589 184 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 FRRS1Q6ZNA5 592 aa11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 ATG4DQ86TL0 474 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 GABRG1Q8N1C3 465 aa11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 ZNF611Q8N823 705 aa11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 FAM71CQ8NEG0 241 aa11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 IGFBPL1Q8WX77 278 aa11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 INPP5KQ9BT40 448 aa11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 BCO1Q9HAY6 547 aa11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 SLC6A13Q9NSD5 602 aa11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 EMC3Q9P0I2 261 aa11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 MARCOQ9UEW3 520 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-212ENST00000494067 E9PBE3 544 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 H7C1Q1 480 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 SULT2B1O00204 365 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 SMAD7O15105 426 aaKnown RBP11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 CLOCKO15516 846 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 CYTIPO60759 359 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 HEXAP06865 529 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 GUSBP08236 651 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 PGM1P36871 562 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 APOBEC1P41238 236 aaKnown RBP11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 PTH2RP49190 550 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 RPS4XP62701 263 aaKnown RBP11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 TXNL4AP83876 142 aaKnown RBP11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 GNA13Q14344 377 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 FAM174BQ3ZCQ3 159 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 HHATQ5VTY9 493 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 SEZ6L2Q6UXD5 910 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 TMPPEQ6ZT21 453 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 Q6ZT83 130 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 Q71RC1 249 aaPredicted RBP11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 MAVSQ7Z434 540 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 ZNF100Q8IYN0 542 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 ZNF619Q8N2I2 560 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 CIARTQ8N365 385 aaPredicted RBP11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 ANKRD42Q8N9B4 389 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 AKAP1Q92667 903 aaKnown RBP eCLIP11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 ROPN1LQ96C74 230 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 MUCL1Q96DR8 90 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 DNAJA3Q96EY1 480 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 TRMT61AQ96FX7 289 aaKnown RBP11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 ZBTB18Q99592 522 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 PSD2Q9BQI7 771 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 SLC35A5Q9BS91 424 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 POTEKPQ9BYX7 375 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 WDR55Q9H6Y2 383 aaPredicted RBP11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 ACER3Q9NUN7 267 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 AIG1Q9NVV5 245 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 RNF115Q9Y4L5 304 aa11.89□□□□□ -0.51
CTDSP1-212ENST00000494067 GOLGA8QA0A0J9YX86 632 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 GOLGA8OA6NCC3 632 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 ZNF724A8MTY0 619 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 ZNF814B7Z6K7 855 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 GOLGA8NF8WBI6 632 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 HMGN4O00479 90 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 SMAD9O15198 467 aaKnown RBP11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 SNNO75324 88 aaPredicted RBP11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 UQCRBP14927 111 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 EPHA3P29320 983 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 RYKP34925 604 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 OR3A2P47893 321 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 DIO1P49895 249 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 ATP5J2P56134 94 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 MAPK11Q15759 364 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 STK11Q15831 433 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 SYT14P1Q58G82 188 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 OGFOD2Q6N063 350 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 BHLHA15Q7RTS1 189 aaPredicted RBP11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 SPATA19Q7Z5L4 167 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 GALNT5Q7Z7M9 940 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 UBE2J2Q8N2K1 259 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 ARFGAP2Q8N6H7 521 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 ZNF75CPQ92670 426 aaPredicted RBP11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 FBXW5Q969U6 566 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 GTPBP3Q969Y2 492 aaKnown RBP11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 NEURL3Q96EH8 262 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 COX4I2Q96KJ9 171 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 PANX1Q96RD7 426 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 ZNF300Q96RE9 604 aaPredicted RBP11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 SAP130Q9H0E3 1048 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 LIPT1Q9Y234 373 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 GPR45Q9Y5Y3 372 aa11.88□□□□□ -0.51
CTDSP1-212ENST00000494067 TMEM120BA0PK00 339 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 TRPC5OSA6NMA1 111 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 GPR171O14626 319 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 CNOT4O95628 575 aaKnown RBP11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 CHRM4P08173 479 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 PAX1P15863 534 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 HTR3AP46098 478 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 CLK1P49759 484 aaKnown RBP11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 KCNJ10P78508 379 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 PPP2R2BQ00005 443 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 CHRNEQ04844 493 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 TAB1Q15750 504 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 SYPL1Q16563 259 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 COX20Q5RI15 118 aa11.87□□□□□ -0.51
CTDSP1-212ENST00000494067 NCMAPQ5T1S8 102 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms