RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CUL9Q8IWT3 2517 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.75□□□□□ -0.85
CLCN6-208ENST00000494028 A0A1W2PQD3 144 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 C17orf51A8MQB3 221 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 J3QRK9 145 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 AGRPO00253 132 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF264O43296 627 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 PTP4A3O75365 173 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 GPX5O75715 221 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 OR7A10O76100 309 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 BMP4P12644 408 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 BMP7P18075 431 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 IL12BP29460 328 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 CCR4P51679 360 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 BMXP51813 675 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 NR0B1P51843 470 aaKnown RBP9.75□□□□□ -0.85
CLCN6-208ENST00000494028 DAB2P98082 770 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF117Q03924 483 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 CRMP1Q14194 572 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 CLPPQ16740 277 aaPredicted RBP9.75□□□□□ -0.85
CLCN6-208ENST00000494028 ANKDD1AQ495B1 522 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 TRIM61Q5EBN2 209 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 OR2G6Q5TZ20 316 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 FAAH2Q6GMR7 532 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 WBP2NLQ6ICG8 309 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 PLBD1Q6P4A8 553 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 CBLN3Q6UW01 205 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 LINC00299Q6ZSB3 139 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 SLC29A4Q7RTT9 530 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 CPOQ8IVL8 374 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 CDK20Q8IZL9 346 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 SLC15A4Q8N697 577 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 DTWD2Q8NBA8 298 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 C17orf47Q8NEP4 570 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 NFAM1Q8NET5 270 aaPredicted RBP9.75□□□□□ -0.85
CLCN6-208ENST00000494028 OR4F15Q8NGB8 312 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 OR6Q1Q8NGQ2 317 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 PHOSPHO1Q8TCT1 267 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 DNAJA4Q8WW22 397 aaPredicted RBP9.75□□□□□ -0.85
CLCN6-208ENST00000494028 TM9SF4Q92544 642 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF524Q96C55 264 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 ADOQ96SZ5 270 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 SPSB2Q99619 263 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 MESP1Q9BRJ9 268 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF649Q9BS31 505 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 TMEM43Q9BTV4 400 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 IFT27Q9BW83 186 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 RTN4RQ9BZR6 473 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 SLC7A5P2Q9GIP4 190 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 MED20Q9H944 212 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 APMAPQ9HDC9 416 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 PALMDQ9NP74 551 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 ISYNA1Q9NPH2 558 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 FBXO8Q9NRD0 319 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 SEC14L4Q9UDX3 406 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 MRTO4Q9UKD2 239 aaKnown RBP9.75□□□□□ -0.85
CLCN6-208ENST00000494028 FBXO4Q9UKT5 387 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 STUB1Q9UNE7 303 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 BAIAP2Q9UQB8 552 aa9.75□□□□□ -0.85
CLCN6-208ENST00000494028 ASCC3Q8N3C0 2202 aaKnown RBP9.75□□□□□ -0.85
CLCN6-208ENST00000494028 IGHV3-20A0A0C4DH32 117 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 ZC3H12DA2A288 527 aaKnown RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 CDC14CA4D256 554 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 FAM86C2PA6NEL3 165 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 VSTM2BA6NLU5 285 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 RIIAD1A6NNX1 92 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 IDSB3KWA1 339 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 ALG1L2C9J202 215 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 MCIDASD6RGH6 385 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 LRRN3E7EW58 273 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 J3QRE1 110 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 NTN3O00634 580 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 ALOX12BO75342 701 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 REM1O75628 298 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 PPM1BO75688 479 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 NDUFB2O95178 105 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 IGF2P01344 180 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 CPEP16870 476 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 SLC2A5P22732 501 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 NOS3P29474 1203 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 SLC9A3P48764 834 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 RPS3AP61247 264 aaKnown RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 RPS4XP62701 263 aaKnown RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 TUBA1BP68363 451 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 FOXK2Q01167 660 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF846Q147U1 533 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF829Q3KNS6 432 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF791Q3KP31 576 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 GXYLT1Q4G148 440 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 SLC35F1Q5T1Q4 408 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 ARMC4Q5T2S8 1044 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 PHF19Q5T6S3 580 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 HLA-DQA1Q5Y7H0 255 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 SLC23A3Q6PIS1 610 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 TUBA1AQ71U36 451 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 OAFQ86UD1 273 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 IGFN1Q86VF2 1251 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 PHC2Q8IXK0 858 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 AMER2Q8N7J2 671 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 TMEM99Q8N816 258 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms