RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 QRSL1Q9H0R6 528 aaKnown RBP11.05□□□□□ -0.64
UPF3A-210ENST00000493727 GORASP2Q9H8Y8 452 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 MTHFD2LQ9H903 347 aaPredicted RBP11.05□□□□□ -0.64
UPF3A-210ENST00000493727 ZFP64Q9NPA5 681 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 SAMD4AQ9UPU9 718 aaKnown RBP11.05□□□□□ -0.64
UPF3A-210ENST00000493727 IFT52Q9Y366 437 aa11.05□□□□□ -0.64
UPF3A-210ENST00000493727 LOC100996750A0A140TA64 210 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 ACOT8O14734 319 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 PEX1O43933 1283 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 ZNF354AO60765 605 aaPredicted RBP11.04□□□□□ -0.64
UPF3A-210ENST00000493727 UGT2B11O75310 529 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 OR6B1O95007 311 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 DBIP07108 87 aaKnown RBP11.04□□□□□ -0.64
UPF3A-210ENST00000493727 GUSBP08236 651 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 IL7RP16871 459 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 PTGS2P35354 604 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 CLK3P49761 638 aaKnown RBP11.04□□□□□ -0.64
UPF3A-210ENST00000493727 ATP12AP54707 1039 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 KPNB1Q14974 876 aaKnown RBP11.04□□□□□ -0.64
UPF3A-210ENST00000493727 GRAMD1BQ3KR37 738 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 EIPR1Q53HC9 387 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 PDZK1Q5T2W1 519 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 TMEM211Q6ICI0 200 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 FKBP9P1Q75LS8 142 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 NUP54Q7Z3B4 507 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 CDH24Q86UP0 819 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 ZNF227Q86WZ6 799 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 DOLPP1Q86YN1 238 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 OR10G3Q8NGC4 313 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 PMM1Q92871 262 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 TAMM41Q96BW9 452 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 TPD52L3Q96J77 140 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 DMRTA2Q96SC8 542 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 KRTAP4-6Q9BYQ5 205 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 TBL1XR1Q9BZK7 514 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 ARMC7Q9H6L4 198 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 METTL7AQ9H8H3 244 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 UBQLN4Q9NRR5 601 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 KLHL28Q9NXS3 571 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 KLRF1Q9NZS2 232 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 ZNF443Q9Y2A4 671 aaPredicted RBP11.04□□□□□ -0.64
UPF3A-210ENST00000493727 DSPPQ9NZW4 1301 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 ABCA4P78363 2273 aa11.04□□□□□ -0.64
UPF3A-210ENST00000493727 HCFC1P51610 2035 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 MAP1AP78559 2803 aaPredicted RBP11.03□□□□□ -0.64
UPF3A-210ENST00000493727 AGAP5A6NIR3 686 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 AQP12BA6NM10 295 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 H3BNH8 94 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 SCO2O43819 266 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 UGT2B17O75795 530 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 MFN2O95140 757 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 HTR3BO95264 441 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 OXSR1O95747 527 aaPredicted RBP11.03□□□□□ -0.64
UPF3A-210ENST00000493727 PABPC4LP0CB38 370 aaKnown RBP11.03□□□□□ -0.64
UPF3A-210ENST00000493727 PSMA4P25789 261 aaKnown RBP11.03□□□□□ -0.64
UPF3A-210ENST00000493727 EVI2BP34910 448 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 NTRK2Q16620 822 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 CBLL1Q75N03 491 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 VRK2Q86Y07 508 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 AQP12AQ8IXF9 295 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 ZFP62Q8NB50 900 aaPredicted RBP11.03□□□□□ -0.64
UPF3A-210ENST00000493727 FAM57AQ8TBR7 257 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 CA5BP1Q8WTZ4 195 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 ASB5Q8WWX0 329 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 OIT3Q8WWZ8 545 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 PROX1Q92786 737 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 POP5Q969H6 163 aaKnown RBP11.03□□□□□ -0.64
UPF3A-210ENST00000493727 PINK1Q9BXM7 581 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 DENND2DQ9H6A0 471 aaPredicted RBP11.03□□□□□ -0.64
UPF3A-210ENST00000493727 HHATLQ9HCP6 504 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.03□□□□□ -0.64
UPF3A-210ENST00000493727 DCAF13Q9NV06 445 aaKnown RBP11.03□□□□□ -0.64
UPF3A-210ENST00000493727 FLRT3Q9NZU0 649 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 REV1Q9UBZ9 1251 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 BAG5Q9UL15 447 aa11.03□□□□□ -0.64
UPF3A-210ENST00000493727 PRRC2AP48634 2157 aaKnown RBP11.03□□□□□ -0.64
UPF3A-210ENST00000493727 CENPVL1A0A0U1RR11 272 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 DHRS12A0PJE2 317 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 PRAMEF25A6NGN4 478 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 SERINC4A6NH21 518 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 ACOT7O00154 380 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 GTPBP1O00178 669 aaKnown RBP11.02□□□□□ -0.65
UPF3A-210ENST00000493727 GCM2O75603 506 aaPredicted RBP11.02□□□□□ -0.65
UPF3A-210ENST00000493727 CYP7B1O75881 506 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 TPOP07202 933 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 TBXA2RP21731 343 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 PRKAR1BP31321 381 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 ACTR3P61158 418 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 HSF1Q00613 529 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 DMTNQ08495 405 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 CCNIQ14094 377 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 ZNF141Q15928 474 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 MAPK14Q16539 360 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 ZNF791Q3KP31 576 aaPredicted RBP11.02□□□□□ -0.65
UPF3A-210ENST00000493727 ARHGAP11AQ6P4F7 1023 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 DHRS4L2Q6PKH6 230 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 ZNF836Q6ZNA1 936 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 RTL4Q6ZR62 310 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 EIF3MQ7L2H7 374 aaKnown RBP11.02□□□□□ -0.65
UPF3A-210ENST00000493727 CHERPQ8IWX8 916 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms