RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 EGLN2Q96KS0 407 aa12.74□□□□□ -0.37
SSR4-212ENST00000491833 MRGPRX4Q96LA9 322 aa12.74□□□□□ -0.37
SSR4-212ENST00000491833 NTMQ9P121 344 aa12.74□□□□□ -0.37
SSR4-212ENST00000491833 ICAM5Q9UMF0 924 aa12.74□□□□□ -0.37
SSR4-212ENST00000491833 CARD8Q9Y2G2 431 aa12.74□□□□□ -0.37
SSR4-212ENST00000491833 LOC100289279A0A1B0GTE1 492 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 CIB4A0PJX0 185 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 SLC35F4A4IF30 521 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 H3BNH8 94 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 OIP5O43482 229 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 SKAP2O75563 359 aaPredicted RBP12.73□□□□□ -0.37
SSR4-212ENST00000491833 PGRP06401 933 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 CHRNGP07510 517 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 ATP6V1C1P21283 382 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 CD40P25942 277 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 WDR4P57081 412 aaKnown RBP12.73□□□□□ -0.37
SSR4-212ENST00000491833 CHRNB3Q05901 458 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 MPP2Q14168 576 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 GGTLC2Q14390 218 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 SQLEQ14534 574 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 TOMM34Q15785 309 aaPredicted RBP12.73□□□□□ -0.37
SSR4-212ENST00000491833 ZNF385BQ569K4 471 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 TRIM46Q7Z4K8 759 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 UBE2J2Q8N2K1 259 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 TMCO5AQ8N6Q1 288 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 PPCDCQ96CD2 204 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 PIMREGQ9BSJ6 248 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 BTBD2Q9BX70 525 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 DUSP22Q9NRW4 184 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 GIN1Q9NXP7 522 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 EMC3Q9P0I2 261 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 FKBP7Q9Y680 259 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 PMF1-BGLAPU3KQ54 211 aa12.73□□□□□ -0.37
SSR4-212ENST00000491833 C9JVG2 144 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 M0R1B8 84 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 SLC28A1O00337 649 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 LYPLA1O75608 230 aaPredicted RBP12.72□□□□□ -0.37
SSR4-212ENST00000491833 APEHP13798 732 aaKnown RBP12.72□□□□□ -0.37
SSR4-212ENST00000491833 FRKP42685 505 aaPredicted RBP12.72□□□□□ -0.37
SSR4-212ENST00000491833 PDLIM4P50479 330 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 RNF144AP50876 292 aaPredicted RBP12.72□□□□□ -0.37
SSR4-212ENST00000491833 CHRNEQ04844 493 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 BST1Q10588 318 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 EXOSC6Q5RKV6 272 aaKnown RBP12.72□□□□□ -0.37
SSR4-212ENST00000491833 KANK2Q63ZY3 851 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 ZNF614Q8N883 585 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 TWIST2Q8WVJ9 160 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 CDS1Q92903 461 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 ZNF775Q96BV0 537 aaPredicted RBP12.72□□□□□ -0.37
SSR4-212ENST00000491833 C16orf58Q96GQ5 468 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 METTL2AQ96IZ6 378 aaKnown RBP12.72□□□□□ -0.37
SSR4-212ENST00000491833 OR5B2Q96R09 309 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 STACQ99469 402 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 INPP5KQ9BT40 448 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 HOXD1Q9GZZ0 328 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 ACSS1Q9NUB1 689 aaPredicted RBP12.72□□□□□ -0.37
SSR4-212ENST00000491833 RAP2CQ9Y3L5 183 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 SLC25A15Q9Y619 301 aa12.72□□□□□ -0.37
SSR4-212ENST00000491833 PLCE1Q9P212 2302 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 NPIPA5A0A0B4J1W7 369 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 A0A1W2PR80 420 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 CCT8L1PA6NM43 557 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 NPIPA7E9PJI5 369 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 GTPBP1O00178 669 aaKnown RBP12.71□□□□□ -0.37
SSR4-212ENST00000491833 NDUFS8O00217 210 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 KIAA0513O60268 411 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 TBX19O60806 448 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 SEC22BO75396 215 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 H6PDO95479 791 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 IGHV3-9P01782 118 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 NPIPA8P0DM63 369 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 CCR4P51679 360 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 RUNX1T1Q06455 604 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 LASP1Q14847 261 aaKnown RBP12.71□□□□□ -0.37
SSR4-212ENST00000491833 PDCD2Q16342 344 aaPredicted RBP12.71□□□□□ -0.37
SSR4-212ENST00000491833 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 FBXW9Q5XUX1 488 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 ABLIM2Q6H8Q1 611 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 TOR1AIP2Q8NFQ8 470 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 RFWD2Q8NHY2 731 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 GPR119Q8TDV5 335 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 ZNF75CPQ92670 426 aaPredicted RBP12.71□□□□□ -0.37
SSR4-212ENST00000491833 APH1AQ96BI3 265 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 MSI2Q96DH6 328 aaKnown RBP12.71□□□□□ -0.37
SSR4-212ENST00000491833 FAM120BQ96EK7 910 aaKnown RBP12.71□□□□□ -0.37
SSR4-212ENST00000491833 CCT7Q99832 543 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 PIGUQ9H490 435 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 REEP4Q9H6H4 257 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 ZCCHC3Q9NUD5 404 aaKnown RBP12.71□□□□□ -0.37
SSR4-212ENST00000491833 THAP1Q9NVV9 213 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 TAS2R16Q9NYV7 291 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 SH3BP4Q9P0V3 963 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 TRAF6Q9Y4K3 522 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 ATP23Q9Y6H3 246 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 MALRD1Q5VYJ5 2156 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 ALPK2Q86TB3 2170 aa12.71□□□□□ -0.37
SSR4-212ENST00000491833 VWC2LB2RUY7 222 aa12.7□□□□□ -0.38
SSR4-212ENST00000491833 TMEM233B4DJY2 109 aa12.7□□□□□ -0.38
SSR4-212ENST00000491833 ETV2O00321 342 aaPredicted RBP12.7□□□□□ -0.38
SSR4-212ENST00000491833 WIPF1O43516 503 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms