RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 COPZ1P61923 177 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 UFM1P61960 85 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 CAPRIN1Q14444 709 aaKnown RBP14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 TOMM34Q15785 309 aaPredicted RBP14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 NDUFAF6Q330K2 333 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 SYT14P1Q58G82 188 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 TYW3Q6IPR3 259 aaKnown RBP14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 ALKBH2Q6NS38 261 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 LRRC74BQ6ZQY2 392 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 TMPPEQ6ZT21 453 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 GALNT5Q7Z7M9 940 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 RNF130Q86XS8 419 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 TMEM171Q8WVE6 324 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 DDIT4LQ96D03 193 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 ITCHQ96J02 903 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 MAGEB18Q96M61 343 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 CXorf56Q9H5V9 222 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 WDR55Q9H6Y2 383 aaPredicted RBP14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 CHRNA9Q9UGM1 479 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 HDGFL3Q9Y3E1 203 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 MED12Q93074 2177 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 ADGRG4Q8IZF6 3080 aa14.77□□□□□ -0.05
PDLIM2-217ENST00000491330 DEFB108AA8MXU0 73 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 ETV2O00321 342 aaPredicted RBP14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 OIP5O43482 229 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 CNOT4O95628 575 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 ZCCHC18P0CG32 403 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 ADSLP30566 484 aaPredicted RBP14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 ADAM8P78325 824 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 ITGADQ13349 1161 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 SFRP5Q5T4F7 317 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 MTDHQ86UE4 582 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 MIER2Q8N344 545 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 PIGXQ8TBF5 258 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 NPAS1Q99742 590 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 NAA11Q9BSU3 229 aaPredicted RBP14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 TCF7L2Q9NQB0 619 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 P2RX2Q9UBL9 471 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 F8P00451 2351 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 OTOGQ6ZRI0 2925 aa14.76□□□□□ -0.05
PDLIM2-217ENST00000491330 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 A0A1W2PNR3 127 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 ZNF724A8MTY0 619 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 HMGN4O00479 90 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 EIF1BO60739 113 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 DIAPH2O60879 1101 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 NTN1O95631 604 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 PGM1P36871 562 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 CRATP43155 626 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 IDH2P48735 452 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 DIO1P49895 249 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 CRISP3P54108 245 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 PHC1P78364 1004 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 CHRNEQ04844 493 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 LARS2Q15031 903 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 SLC9B1Q4ZJI4 515 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 C6orf10Q5SRN2 563 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 FRRS1Q6ZNA5 592 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 CXorf67Q86X51 503 aaPredicted RBP14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 UBE2J2Q8N2K1 259 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 WDR60Q8WVS4 1066 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 CKAP2Q8WWK9 683 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 ZBTB9Q96C00 473 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 BDH2Q9BUT1 245 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 SRXN1Q9BYN0 137 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 QRSL1Q9H0R6 528 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 SERHL2Q9H4I8 314 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 RABEP2Q9H5N1 569 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 BCO1Q9HAY6 547 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 PARPBPQ9NWS1 579 aa14.75□□□□□ -0.05
PDLIM2-217ENST00000491330 MED12LQ86YW9 2145 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 FAM234BA2RU67 622 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 CFAP73A6NFT4 308 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 AGAP5A6NIR3 686 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 EFNA2O43921 213 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 CYTIPO60759 359 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 DNAJA2O60884 412 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 ADAP00813 363 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 CD3EP07766 207 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 SHC1P29353 583 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 CCKARP32238 428 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 ATP4BP51164 291 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 POLR2HP52434 150 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 FOXD4Q12950 439 aaPredicted RBP14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 PDK3Q15120 406 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 TFAP2EQ6VUC0 442 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 ZNF704Q6ZNC4 412 aaPredicted RBP14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 Q6ZT83 130 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 BIVMQ86UB2 503 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 P2RY8Q86VZ1 359 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 S100PBPQ96BU1 408 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 PLPPR2Q96GM1 343 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 C18orf12Q96KH6 178 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 TEX37Q96LM6 180 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 POTEKPQ9BYX7 375 aa14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 NOSIPQ9Y314 301 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-217ENST00000491330 KIAA1549Q9HCM3 1950 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 IGHV3-15A0A0B4J1V0 119 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 PMS2P2O95744 297 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 GSNP06396 782 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms