RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PLEKHA1Q9HB21 404 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 CDHR4A6H8M9 788 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 NAP1L6A6NFF2 107 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 PRKRAO75569 313 aaKnown RBP17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 ADRB1P08588 477 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 TYRP14679 529 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 NTSP30990 170 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 SLC16A1P53985 500 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 B2MP61769 119 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 ARSIQ5FYB1 569 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 UBE2NLQ5JXB2 153 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 TMEM64Q6YI46 380 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 CMTM4Q8IZR5 234 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 OR5J2Q8NH18 312 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 ELP4Q96EB1 424 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 NRTNQ99748 197 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 C1QTNF2Q9BXJ5 285 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 NOX3Q9HBY0 568 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 AKAP7Q9P0M2 348 aaPredicted RBP17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 GPR160Q9UJ42 338 aa17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 PCDHGA9Q9Y5G4 932 aaKnown RBP17.92■□□□□ 0.46
SNAPC3-206ENST00000490969 GLOD5A6NK44 160 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 ARPC5O15511 151 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 ECDO95905 644 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 ATP1B1P05026 303 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 TYRP1P17643 537 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 PYCR1P32322 319 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 SEC61A1P61619 476 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 POM121L1PQ3SYA9 428 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 TCEAL5Q5H9L2 206 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 APOOLQ6UXV4 268 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 C17orf107Q6ZR85 190 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 TMUB2Q71RG4 321 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 C11orf96Q7Z7L8 435 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 BRIX1Q8TDN6 353 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 GANCQ8TET4 914 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 DMRTA2Q96SC8 542 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 ZDHHC5Q9C0B5 715 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 NKX2-4Q9H2Z4 354 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 COPS3Q9UNS2 423 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 MRPS23Q9Y3D9 190 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 CREBL2O60519 120 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 LDOC1O95751 146 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 GABRA1P14867 456 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 ACADLP28330 430 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 ZNF85Q03923 595 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 TGM3Q08188 693 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 GRM7Q14831 915 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 LRRTM4Q86VH4 590 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 NAXDQ8IW45 347 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 ZNF454Q8N9F8 522 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 OR52I2Q8NH67 350 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 OR1S1Q8NH92 325 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 SMAP2Q8WU79 429 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 HMGB4Q8WW32 186 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 ST8SIA2Q92186 375 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 IRF7Q92985 503 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 NPAS1Q99742 590 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 PELI2Q9HAT8 420 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 KLHL28Q9NXS3 571 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 NTMQ9P121 344 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 ASF1AQ9Y294 204 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 PRELID3BQ9Y3B1 194 aa17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 AK6Q9Y3D8 172 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-206ENST00000490969 ANTXRLA6NF34 631 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 SLC22A31A6NKX4 558 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 PPM1DO15297 605 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 ERAL1O75616 437 aaKnown RBP17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 APOC3P02656 99 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 ELFN1P0C7U0 828 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 PPP3CBP16298 524 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 AP3S2P59780 193 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 NHLRC1Q6VVB1 395 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 DPPA4Q7L190 304 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 EIF4E3Q8N5X7 224 aaKnown RBP17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 CLRN3Q8NCR9 226 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 FANK1Q8TC84 345 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 SFXN5Q8TD22 340 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 OR7D2Q96RA2 312 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 TEAD3Q99594 435 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 OR51V1Q9H2C8 321 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 TAS2R5Q9NYW4 299 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 ADAM29Q9UKF5 820 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 DNASE2O00115 360 aaPredicted RBP17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 BHLHE40O14503 412 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 OR5F1O95221 314 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 HNRNPA1P09651 372 aaKnown RBP eCLIP17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 HOXB3P14651 431 aaPredicted RBP17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 FUT1P19526 365 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 ANXA7P20073 488 aaKnown RBP17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 FXYD6P3P58550 94 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 ZNF626Q68DY1 528 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 PDZD9Q8IXQ8 264 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 OR52L1Q8NGH7 329 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 OR5AR1Q8NGP9 310 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 RAD51AP1Q96B01 352 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 ENKD1Q9H0I2 346 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 SPHK2Q9NRA0 654 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 ATPIF1Q9UII2 106 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 FBXL3Q9UKT7 428 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms