RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 VCX3BQ9H321 246 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 TRIM45Q9H8W5 580 aaPredicted RBP6.9□□□□□ -1.3
CLDN1-202ENST00000490800 Q9N2J8 555 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 COPS7AQ9UBW8 275 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 KCNE5Q9UJ90 142 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF223Q9UK11 482 aaPredicted RBP6.9□□□□□ -1.3
CLDN1-202ENST00000490800 CBLCQ9ULV8 474 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 OAZ3Q9UMX2 235 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 CFL2Q9Y281 166 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF443Q9Y2A4 671 aaPredicted RBP6.9□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF835Q9Y2P0 537 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 SH3GLB1Q9Y371 365 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 CHST2Q9Y4C5 530 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 LRRC42Q9Y546 428 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 ENPP4Q9Y6X5 453 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 DIDO1Q9BTC0 2240 aaKnown RBP6.9□□□□□ -1.3
CLDN1-202ENST00000490800 CSMD1Q96PZ7 3565 aa6.9□□□□□ -1.31
CLDN1-202ENST00000490800 MYO7BQ6PIF6 2116 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 TRBV11-1A0A0K0K1C0 115 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 FRG2CA6NGY1 282 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 ENO4A6NNW6 628 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 NPIPB9F8W1W9 429 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 J3KTA2 159 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 M0R3H8 397 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 PDLIM1O00151 329 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 SOCS2O14508 198 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 GNGT2O14610 69 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 TO15178 435 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 NME2P1O60361 137 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 ITGA10O75578 1167 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 IFNW1P05000 195 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 DBIP07108 87 aaKnown RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 ZNF23P17027 643 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 DRD5P21918 477 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 ADMP35318 185 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 RFC3P40938 356 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 YAP1P46937 504 aaKnown RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 RFX3P48380 749 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 MEOX1P50221 254 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 AQP4P55087 323 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 DCAF7P61962 342 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 EEF1A1P68104 462 aaKnown RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 RNF4P78317 190 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 ADORA2A-AS1P86434 159 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 PPP1R8Q12972 351 aaKnown RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 CDSNQ15517 529 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 NPTX1Q15818 432 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 FLYWCH1Q4VC44 716 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 LIN52Q52LA3 116 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 PPP4R4Q6NUP7 873 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 MTFR2Q6P444 385 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 XKRXQ6PP77 449 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 TBPL2Q6SJ96 375 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 RPTNQ6XPR3 784 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 ZNF836Q6ZNA1 936 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 C16orf47Q6ZP98 133 aaPredicted RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 Q6ZPB1 254 aaPredicted RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 ZBTB49Q6ZSB9 765 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 NCCRP1Q6ZVX7 275 aaPredicted RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 SLC29A4Q7RTT9 530 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 MDGA2Q7Z553 956 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 RBM45Q8IUH3 476 aaKnown RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 MCEMP1Q8IX19 187 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 PEX5LQ8IYB4 626 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 GHDCQ8N2G8 530 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 CLIP4Q8N3C7 705 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 GALNT4Q8N4A0 578 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 CBR4Q8N4T8 237 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 TMEM156Q8N614 296 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 OR5K1Q8NHB7 308 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 VANGL1Q8TAA9 524 aaPredicted RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 DNAJC9Q8WXX5 260 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 PMM1Q92871 262 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 LCORQ96JN0 433 aaPredicted RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 GAL3ST4Q96RP7 486 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 ZNF347Q96SE7 839 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 ZNF184Q99676 751 aaPredicted RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 ARHGDIGQ99819 225 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 C9orf16Q9BUW7 83 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 WWTR1Q9GZV5 400 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 LIN28AQ9H9Z2 209 aaKnown RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 CNOT11Q9UKZ1 510 aaKnown RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 TMA7Q9Y2S6 64 aaKnown RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 C15orf41Q9Y2V0 281 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 IFT52Q9Y366 437 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 OR10H1Q9Y4A9 318 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 MAGED1Q9Y5V3 778 aaPredicted RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 KLF2Q9Y5W3 355 aaPredicted RBP6.89□□□□□ -1.31
CLDN1-202ENST00000490800 CPAMD8Q8IZJ3 1885 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 CREBBPQ92793 2442 aa6.89□□□□□ -1.31
CLDN1-202ENST00000490800 LRBAP50851 2863 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 C2orf92A0A1B0GVN3 265 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 C7orf72A4D263 438 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 TMEM200CA6NKL6 621 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 CLDN24A6NM45 220 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 H0YJX3 145 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 KLRC4-KLRK1H3BQV0 150 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 FFAR1O14842 300 aa6.88□□□□□ -1.31
CLDN1-202ENST00000490800 FRS3O43559 492 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms