RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ACSM5Q6NUN0 579 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 LETMD1Q6P1Q0 360 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 ANKRD16Q6P6B7 361 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 TMPPEQ6ZT21 453 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 RHOUQ7L0Q8 258 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 MMGT1Q8N4V1 131 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 PTGR2Q8N8N7 351 aaPredicted RBP11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 SYT14Q8NB59 555 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 WFDC12Q8WWY7 111 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 HOXB13Q92826 284 aaPredicted RBP11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 YIPF5Q969M3 257 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 PHF21BQ96EK2 531 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 OTUB1Q96FW1 271 aaPredicted RBP11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 AMDHD1Q96NU7 426 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 ZNF442Q9H7R0 627 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 ZMAT3Q9HA38 289 aaKnown RBP11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 ZNF275Q9NSD4 429 aaPredicted RBP11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 NMRK1Q9NWW6 199 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 OPN4Q9UHM6 478 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 PCTPQ9UKL6 214 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 TTC36A6NLP5 189 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 J3QLI3 93 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 GPR171O14626 319 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 PPIHO43447 177 aaKnown RBP11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 PRB2P02812 416 aaPredicted RBP11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 ANPEPP15144 967 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 TCN1P20061 433 aaPredicted RBP11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 DDCP20711 480 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 ACHEP22303 614 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 SLC25A53Q5H9E4 307 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 METTL2BQ6P1Q9 378 aaKnown RBP11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 C3orf33Q6P1S2 294 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 CCDC103Q8IW40 242 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 ZBED8Q8IZ13 594 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 RIBC1Q8N443 379 aaPredicted RBP11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 NUP37Q8NFH4 326 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 OR4F15Q8NGB8 312 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 OR6Y1Q8NGX8 325 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 RFWD2Q8NHY2 731 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 CDC26Q8NHZ8 85 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 UBE2FQ969M7 185 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 TMIGD2Q96BF3 282 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 C7orf69Q9H7B7 122 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 ZNF665Q9H7R5 613 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 SNX6Q9UNH7 406 aa11.77□□□□□ -0.53
EXOSC3-207ENST00000490516 PRPS2P11908 318 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 TSPAN8P19075 237 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 MPGP29372 298 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 CRABP2P29373 138 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 NTSP30990 170 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 SPRP35270 261 aaPredicted RBP11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 PRKAG1P54619 331 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 SUMO3P55854 103 aaPredicted RBP11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 TUBA1BP68363 451 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 TUBA4AP68366 448 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 CSNK2A1P68400 391 aaPredicted RBP11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 C2orf80Q0P641 193 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 QPRTQ15274 297 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 DUSP5Q16690 384 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 VPS26BQ4G0F5 336 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 TIGD2Q4W5G0 525 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 C1QTNF12Q5T7M4 302 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 C17orf107Q6ZR85 190 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 TUBA1AQ71U36 451 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 MTERF4Q7Z6M4 381 aaKnown RBP11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 MYPOPQ86VE0 399 aaPredicted RBP11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 BCL6BQ8N143 479 aaPredicted RBP11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 CDKL2Q92772 493 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 RDH5Q92781 318 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 SLC25A28Q96A46 364 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 APIPQ96GX9 242 aa11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 ZNF48Q96MX3 618 aaPredicted RBP11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 RBM4BQ9BQ04 359 aaKnown RBP11.76□□□□□ -0.53
EXOSC3-207ENST00000490516 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 E7ESA3 106 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 PGRMC1O00264 195 aaKnown RBP11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 NR5A2O00482 541 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 KNG1P01042 644 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 TIA1P31483 386 aaKnown RBP eCLIP11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 PCGF2P35227 344 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 SLC16A1P53985 500 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 TMEM33P57088 247 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 FAM83EQ2M2I3 478 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 SLC9B1Q4ZJI4 515 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 BRICD5Q6PL45 260 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 LRIG3Q6UXM1 1119 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 ZNF551Q7Z340 670 aaPredicted RBP11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 LSRQ86X29 649 aaPredicted RBP11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 KIR3DL3Q8N743 410 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 CDRT4Q8N9R6 151 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 PIGXQ8TBF5 258 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 GIMAP5Q96F15 307 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 ANKRD27Q96NW4 1050 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 CITED1Q99966 193 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 SHCBP1LQ9BZQ2 653 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 GIN1Q9NXP7 522 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 ZNF69Q9UC07 566 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 MID2Q9UJV3 735 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 ZNF225Q9UK10 706 aa11.75□□□□□ -0.53
EXOSC3-207ENST00000490516 GRID1Q9ULK0 1009 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms